Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq7508 113 6e-20 >seq7508 Length=57088 Score = 113 bits (124), Expect = 6e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 47938 GCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAA 47997 ||||| || || || || || ||||||||||| || | | |||| ||||||||||||| Sbjct 52778 GCTCTGGTGATTTTTCGGGTCACAAAAGTTTCGCCCCTGCGTGGACTTTCATGATTAAAA 52837 Query 47998 AGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTAC 48057 ||||||||| | || ||| |||| | || |||||||||||||| || |||||||| Sbjct 52838 AGAATACCATTGCAAGCAAACATATCATAGGATTCACGATAGTTTACAACAATCCAGTAA 52897 Query 48058 CCATAGAGTTTTGCAACACC 48077 |||| |||||||| |||| Sbjct 52898 GCATACAGTTTTGCCGCACC 52917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665385167412920