Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 86.0 7e-12
>seq11759
Length=791511
Score = 86.0 bits (94), Expect = 7e-12
Identities = 167/243 (69%), Gaps = 8/243 (3%)
Strand=Plus/Minus
Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049
||| | ||||| ||||| | || ||| ||| |||||||| | ||||| | | |||
Sbjct 466314 TTTAACGCCATTCAAACGTTGCCGTGTGTTGCTAAGAAGGCCGATTGGGCGCTTAGGTGG 466255
Query 65050 TTTG---ACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAG 65106
||| | | |||| | | ||| ||||||||| || | ||||| || || ||
Sbjct 466254 ATTGCAAATAAAAAGGCAC---CCTACGCCGAGCGTCTGGTGGCGTTCGCTGCCGTTGAA 466198
Query 65107 GGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCAT 65165
|| | ||||| || || ||||| ||| | |||| ||| | |||||||| ||||||||
Sbjct 466197 GGCGTATTCTTTTCTGGTTCATT-TGCTTCCATTTTCTGGCTCAAGAAGCGTGGTCTCAT 466139
Query 65166 GCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT 65225
||| ||||| ||| ||||| || || ||||| || || |||||| ||| ||
Sbjct 466138 GCCTGGCCTCACCTTTAGTAATGAGCTGATCAGTCGAGACGAAGGCCTCCACACGGATTT 466079
Query 65226 TGC 65228
|||
Sbjct 466078 TGC 466076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596471680557280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |