Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq7336 111 3e-19 >seq7336 Length=62802 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || |||| | || || || ||||| | ||| | ||| || ||||||||||||| Sbjct 18544 ATGCCTCCTCGTAGTCTTAGAACAAGATGGAGTGTTGACTCCTTTTGAATATTATAGTCG 18603 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | || ||||| || || ||||| || || | | |||||||| || Sbjct 18604 GAGAGGGTCCGCCCGTCCTCTAACTGCTTACCGGCGAAGATAAGCCGTTGTTGATCTGGT 18663 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 |||||||| ||||| ||||| ||||| | ||||| || || | ||| | |||| Sbjct 18664 GGTATTCCCTCTTTGTCTTGGATTTTTGCTTTTACGTTCTCGATGGAATCACTTGGCTCA 18723 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || ||||| ||||| || || || || || ||||| ||||||||| Sbjct 18724 ACCTCAAGGGTTATGGTTTTTCCAGTGAGAGTCTTAACAAAAATTTGCATT 18774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899506732975920