Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq8752 86.0 5e-12 >seq8752 Length=140378 Score = 86.0 bits (94), Expect = 5e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 105086 GCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCCGGCGA 105145 ||||||||||||||| ||||| ||||| || || | | |||||||| || || |||| Sbjct 3785 GCACGGCTTTCACGTCCACGAATTCGGTGACACAACACAAGGCTGCACTTCGGCTGGCGC 3726 Query 105146 GCACTTCAA-CCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAAAGGCACGTCG 105204 ||||| || ||| ||| || |||| ||||| ||||| || || || || | || || | Sbjct 3725 CCACTTTAATCCCCACG-GCAAAAACCACGGTGCTCCTGATGCTGCTGAGCGACATGTTG 3667 Query 105205 GCGACCTGGGCAATGT 105220 | ||||| || || || Sbjct 3666 GGGACCTCGGTAACGT 3651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398812966125259