Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq6307 223 3e-52 seq8799 172 4e-37 seq12962 168 5e-36 seq3685 140 2e-27 seq5041 138 8e-27 seq9595 129 4e-24 seq7919 122 7e-22 seq6391 122 7e-22 seq5573 116 3e-20 >seq6307 Length=230001 Score = 223 bits (246), Expect = 3e-52 Identities = 414/605 (68%), Gaps = 2/605 (0%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 ||||| ||| ||||| |||| ||||||||| || ||||| | | |||| || Sbjct 29864 ACATCGAAGGTGCCACCGCCCAAATCAAAAATGAGCACATTGCTCTGCCTGTCAACCTTC 29805 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || || | | || |||| |||||||| ||||| ||||||||||| | || ||||| Sbjct 29804 TTGTCCAAGCTGTAGGCAATGGCAGCAGCCGTTGGCTCATTAATAATGCGTAATACATTC 29745 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | |||||| ||| ||||||| || | || ||||| | || ||| || ||||| || Sbjct 29744 AAACCAGCGATTTTTCCTGCGTCCATCGTCGCTTGACACTGGCTATCATTGAAATACGCT 29685 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || || || || || || | ||| ||||| || || | |||||| || |||| ||| Sbjct 29684 GGTACCGTGATCACCGCGTTTGTCACTTCCTTGCCCAAATAAGCTTCCGCCGTTTCCTTC 29625 Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGA 282574 ||||| | | | ||| | || || | || ||| | ||||| | ||| | Sbjct 29624 ATTTTCATAAGCACCATAGCCGAGATCTCCTCCGGAACGAACTGCTT-TACTCACCGCGG 29566 Query 282575 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTC 282634 || ||| || || |||||||| | ||| ||| | |||||||| ||||| || ||| Sbjct 29565 TACTCTACCTC-AATTATGGTTTCCTTCCAGAATTTACCACTTTAAACGGCCAGTACTTC 29507 Query 282635 ATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAA 282694 ||||| ||| || | | |||||| |||| | ||||| | || || | |||||| Sbjct 29506 ATATCACCTTGCACTGTCTTGTCATTGAAATAACGTCCAATCAGACGCTTCACGTCAAAA 29447 Query 282695 ATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCT 282754 | || || || || || | || || |||| || || | ||| || || ||| ||||| Sbjct 29446 ACCGTGTTAGTCGGGTTCAGAGCTGCCTGATTCTTTGCAGAATCACCGATAAGAGGTTCT 29387 Query 282755 GTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATT 282814 | || || || | ||||| || ||||| |||| ||||||||| || ||||| ||| Sbjct 29386 TTTTCCGTGAAGGCCACATAACTGGGCGTTGTTCGATAACCTTGATCGTTGGCAATTATT 29327 Query 282815 TCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 282874 || || || || | ||| | ||||| ||||| |||||||| ||||| || || ||| Sbjct 29326 TCTACCTTGCCGTCTTGAAAGACACCAACACACGAGAAAGTTGTGCCTAAGTCGATGCCA 29267 Query 282875 ATAGC 282879 || || Sbjct 29266 ATGGC 29262 >seq8799 Length=129867 Score = 172 bits (190), Expect = 4e-37 Identities = 401/605 (66%), Gaps = 0/605 (0%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 ||||| ||| || || |||| || ||||| || || || || ||| || || Sbjct 11431 ACATCGAAGGTACCCCCGCCCAAGTCGAAAATGAGCACGTTGCGCTCCTTGCCTACCTTC 11372 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 ||||| | || || || | || || || || || ||||||||||| | ||| ||||| Sbjct 11371 TTATCCAAGCCGTAGGCGATGGCGGCTGCTGTCGGCTCATTAATAATACGCAATACATTC 11312 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | || | || | |||||||| || || || || | || ||||| || || || Sbjct 11311 ATGCCTGATATCGTGCCTGCATCCTTCGTTGCCTGACGCTGACTGTCGTTGAAGTAAGCC 11252 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || || || || || ||||| ||||| | ||| || | || || ||| |||| ||| Sbjct 11251 GGCACCGTGATGACCGCATCAGTTACCTTTTTGCCCAAGTACGCCTCTGCAGTTTCCTTC 11192 Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGA 282574 ||||| || | ||| || || |||| || | ||||||||| ||| || Sbjct 11191 ATTTTTAGTAGTACCATGGACGAGATTTCCTCCGCGCTGAATTGCTTGGTCTCACCACGA 11132 Query 282575 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTC 282634 || |||||||| | || || || ||| || |||||||| ||||||| ||| Sbjct 11131 TACTCTACTTCAATCTTCGGCTTGCCTCCCGAATTGATCACTTTAAAGGGCCAATGCTTC 11072 Query 282635 ATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAA 282694 || || ||| || | | ||| | |||| | ||||| || ||||| ||||| || Sbjct 11071 ATGTCACTTTGCACCGTCTTGTCTTCAAAACGACGTCCAATCAAGCGTTTGGCATCGAAC 11012 Query 282695 ATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCT 282754 | || ||| | ||||| | || | |||| || || ||||| ||||| ||| | ||| Sbjct 11011 ACCGTGTTGCTAGGATTCATGGCTACCTGATTCTTAGCAGCATCACCAATGAGACGCTCT 10952 Query 282755 GTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATT 282814 || || ||||| | ||||| || || || ||||| || || ||||| || || || Sbjct 10951 GTATCCGTAAAGGCGACATAACTCGGTGTAGTACGATTGCCCTGGTCATTGGCGATTATC 10892 Query 282815 TCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 282874 || || || |||| ||| | || || || || ||||| || || ||||| ||||| Sbjct 10891 TCCACCTTGCCATGTTGAAACACGCCAACGCAGGAGAAAGTCGTCCCCAAATCGATACCG 10832 Query 282875 ATAGC 282879 | ||| Sbjct 10831 ACAGC 10827 >seq12962 Length=275956 Score = 168 bits (186), Expect = 5e-36 Identities = 445/670 (66%), Gaps = 16/670 (2%) Strand=Plus/Plus Query 282184 AAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTG 282243 |||||| | |||||| |||||||| || | | ||| | || || || |||| Sbjct 129687 AAGACGCTGATCAAAGTCTTCACCACCAAGATGAGTGTCACCACTGGTCGCAACAACTTC 129746 Query 282244 GAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAA 282303 || | |||| || | | || || | ||||| ||| |||||||||| |||||| Sbjct 129747 AAACACACCATTGTCGATTGTCAGGAGGGAGACATCGAAGGTGCCACCACCCAGATCAAA 129806 Query 282304 AATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGC 282363 | || | |||| |||| |||||| |||| || | ||||| || | ||||| || Sbjct 129807 CACGAGGATATTCTTTTCAGTGTCTT---TTTTGTCCAACCCATAGGCGATCGCAGCTGC 129863 Query 282364 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 282423 ||||||||||| ||||| | ||| || | ||||||||||| || ||||||||||| Sbjct 129864 GGTTGGTTCATTGATAATCCGCAACACGGTCAGACCAGCAATGGCACCAGCATCTTTAGT 129923 Query 282424 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTC 282483 ||||| | ||| | || || || || ||||| ||||| | ||| |||| || ||| | Sbjct 129924 TGCTTGACGTTGGGCGTCATTGAAGTAGGCAGGCACAGTGACAACAGCATGCGTAACTGC 129983 Query 282484 TTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTG 282543 | |||| ||| || || ||| ||||||||||| | || ||| | |||| | Sbjct 129984 AGTGCCAAGATAGGCCTCAGCAATTTCCTTCATTTTACTAAGAACCATAGCCGAAACCTC 130043 Query 282544 TTCTGGAG---AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATT 282600 || || | | || || | | | | ||| |||| | ||| ||||| || Sbjct 130044 CTCGGGGGCGAACCCTTTCT--CCTCCGTCCCTACTTGA-ACTTGCATATACGGTTTGTT 130100 Query 282601 ACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATT 282660 | || || ||||| || || | ||| ||||| ||| ||| || || | Sbjct 130101 ATTCTTGTTGATCACTTTGAACGGGTAGCGTTTGATATCACTTTGCACATCTTTATCGTC 130160 Query 282661 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT--AACTGCA 282718 | |||| | ||| || | ||||| || ||||| | |||||| | ||||| || | || Sbjct 130161 ATAATCACGACCGATGAGACGTTTGGCGTCAAACAAAGTATTCTTAGGATTCGAAGT-CA 130219 Query 282719 GCTTGATATTTGGCTGCATCTCCAATCAGATGTT--CTGTC-TCTGTAAATGAAACATAT 282775 ||||| ||| || || || |||||||| ||| | ||| | | || | |||||| Sbjct 130220 -ATTGATTTTTTGCAGCGTCACCAATCAGTCGTTCACCGTCACCAGAGAAGGCAACATAA 130278 Query 282776 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT 282835 ||||| ||| | || || |||||||| || | ||| |||||||| || |||| | Sbjct 130279 GATGGGGTTATTCGGTTGCCTTGATCGTTTGTAATGATTTCAACACGTCCGTTTTTGAAA 130338 Query 282836 ACACCTACAC 282845 ||||| |||| Sbjct 130339 ACACCAACAC 130348 Score = 120 bits (132), Expect = 2e-21 Identities = 270/405 (67%), Gaps = 12/405 (3%) Strand=Plus/Plus Query 281437 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 281496 |||||||||||| |||| | || || || |||||||||||||| | || | |||| Sbjct 128946 AAGAATACCATTTACATCAATTTCGAAGGTAACTTCAATTTGAGGTAAACCACGAGGAGC 129005 Query 281497 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 281556 || || || ||| ||||| || | |||||| || ||| |||||||| | | || Sbjct 129006 CGGCGGAATGCCTGTCAAATCGAACTTGCCCAGAAAATGATTGTCTTTAGTCATTGGACG 129065 Query 281557 TTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAATAAGTTGTAAA 281613 ||||||||||| | || ||||| |||||| ||||| || | ||| | ||| Sbjct 129066 CTCACCCTCGAATACCTGAATAGT---GACAGTTGGCTGATTGTCGGCGGCAGTCGAAAA 129122 Query 281614 TACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 281673 | | |||||||| ||||| || ||||| ||||| |||||||||| ||| Sbjct 129123 GATTTGCGATTTTTTGGTGGGAATGACAGTATTTCTGGGAATAAGTTTGGTCATAACACC 129182 Query 281674 ACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAG 281733 ||| | || || | ||| | || | || ||||| | || || |||| | Sbjct 129183 CCCAACAGTCTCAATACCCATAGTCAATGGGCAAACATCGAGGAGCACGATATCACCAGT 129242 Query 281734 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793 | |||| | ||| || || | | ||||| | ||||||||||| |||||||| Sbjct 129243 GTCTTCAAC------ACCGCTAATAACACCAGCTTGCACTGCAGCACCATAAGCAACAGC 129296 Query 281794 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838 |||||| || |||| | | | || ||| ||| ||||| || || Sbjct 129297 TTCATCGGGGTTAATACCTCTACTTGGTTCTTTGCCATTAAAGAA 129341 >seq3685 Length=2685 Score = 140 bits (154), Expect = 2e-27 Identities = 407/625 (65%), Gaps = 4/625 (1%) Strand=Plus/Minus Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| ||||||| | || ||| || || ||||||| ||| || | || ||||| Sbjct 2565 TCAATGGACAAAATGGACACGTCAAAAGTGCCGCCACCCAAATCGAAGACGAGCACATTG 2506 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 | | ||| || | |||| || || |||| |||||| || ||||| ||||| Sbjct 2505 TGCTGCTCGTCACTCTTCCTGTCAAAGCCGTAGGCAATAGCAGCTGCTGTTGGCTCATTG 2446 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 |||| | || ||||| | || || | ||||||||||||| | |||| || | ||| Sbjct 2445 ATAAGACGCATCACATTTAAGCCCGCCAATCTTCCTGCATCTATTTTGGCCTGCCGTTGA 2386 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 | | ||||| || || || || || | || || |||||||| || || || | ||| Sbjct 2385 TTAACATTAAAGTACGCTGGCACTGTGACTACCGCGTCTGTTACCTCCTTGCCCAAATAC 2326 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556 | ||||| | ||||| || | | ||| ||||| || ||||||| | | Sbjct 2325 ACCTCTGCTGCCTCCTTCATCTTCGACAGCACCATAGATGAGATCTGTTCTGCAATGAAA 2266 Query 282557 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 282616 ||||| | | || || |||| |||| | ||| | | || ||||| | ||| Sbjct 2265 TGCTTTGCCTTGCCGCGAAATTATACCTCAATCTTCGGTATCTCTCCCACATTTACGACT 2206 Query 282617 TTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 282676 || |||||||| | || || | ||| || || || | || | || || Sbjct 2205 TTGAATGGCCAGTGCTTAATGCTTTCTTGCACTGCTTCATCGTCGAAGCGACGTCCTATC 2146 Query 282677 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCA 282736 | || ||| ||| |||| |||||||| || || | ||| ||| | | || || || Sbjct 2145 AGACGCTTTATATCGAAAACGGTATTGGTGGGGTTTAGTGCTGCTCGGTTCTTTGCGGCC 2086 Query 282737 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 282796 || || || ||| ||| | | ||| || | | ||| || ||||| || |||| Sbjct 2085 TCACCGATGAGACATTCATTGTTTGTGAAGGCTATATAACTGGGTGTTGTTCGGGAACCT 2026 Query 282797 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG-- 282854 ||||| || ||||||||||| || |||||||||| | ||||| ||||| | | | Sbjct 2025 TGATCGTTGGCAATAATTTCCACCATACCATTTTGAAACACACCAACACA--TGAGCGGA 1968 Query 282855 TTGTTCCTAAATCAATACCAATAGC 282879 |||||| |||||||| || ||||| Sbjct 1967 CTGTTCCCAAATCAATGCCGATAGC 1943 >seq5041 Length=10072 Score = 138 bits (152), Expect = 8e-27 Identities = 404/623 (65%), Gaps = 0/623 (0%) Strand=Plus/Minus Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| ||||||| | |||||| || || ||||||| ||| || | || ||||| Sbjct 654 TCAATGGACAAAATGGACACATCAAAAGTGCCGCCACCCAAATCGAAGACGAGCACATTG 595 Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376 | | ||| || | || | || || |||| |||||| || ||||| ||||| Sbjct 594 CGCTGCTCGTCGCTCTTCCTGTCTAAGCCGTAGGCAATAGCAGCTGCTGTTGGCTCATTG 535 Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436 |||| | || ||||| | || || | ||||||||||||| | ||||| || | ||| Sbjct 534 ATAAGACGCATCACATTTAAGCCCGCCAATCTTCCTGCATCTATTGTGGCCTGCCGTTGA 475 Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496 | | ||||| || || || || || || || || |||||||| || || || | ||| Sbjct 474 TTAACATTAAAGTACGCTGGCACTGTGATTACCGCGTCTGTTACCTCCTTGCCCAAATAC 415 Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556 || ||||| | ||||| || | | ||| ||||| || ||||||| | | Sbjct 414 GCCTCTGCTGCCTCCTTCATCTTCGACAGCACCATAGATGAGATCTGTTCTGCAATGAAA 355 Query 282557 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 282616 |||| | | | || ||| |||| | ||| | | || ||||| | ||| Sbjct 354 TGCTCTGCCTTGCCGCCAAATTGTACCTCAATCTTCGGTATCTCTCCCACATTTACGACT 295 Query 282617 TTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 282676 || |||||||| | || || | ||| || || || | || | || ||| Sbjct 294 TTGAATGGCCAGTGCTTAATGCTTTCTTGCACTGCTTCATCGTCGAAGCGACGTCCTATT 235 Query 282677 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCA 282736 | | ||| ||| |||| |||||||| || || | ||| || || | || || || Sbjct 234 AGACACTTTATATCGAAAACGGTATTGGTGGGGTTTAGTGCTGCCTGGTTCTTTGCGGCC 175 Query 282737 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 282796 || || || ||| | || | ||||| || | ||||| || ||||| || |||| Sbjct 174 TCACCGATGAGACGNTCATTGTCTGTGAAGGCTACATAACTGGGTGTTGTTCGGGAACCT 115 Query 282797 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTT 282856 ||||| | || |||||||| || | |||||||| | ||||| ||||| | | Sbjct 114 TGATCGNTGGCGATAATTTCCACCCTGCCATTTTGAAACACACCAACACATGAGCAGACT 55 Query 282857 GTTCCTAAATCAATACCAATAGC 282879 ||||| |||||||| || ||||| Sbjct 54 GTTCCCAAATCAATGCCGATAGC 32 >seq9595 Length=4027 Score = 129 bits (142), Expect = 4e-24 Identities = 352/536 (66%), Gaps = 6/536 (1%) Strand=Plus/Plus Query 282347 TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATT 282406 || |||| |||||| || ||||| ||| | | || | || ||||| | ||| |||||| Sbjct 27 TAGGCAAGAGCAGCTGCCGTTGGCTCACTGACGATGCGCATCACATTCAAACCCGCAATT 86 Query 282407 CTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATA 282466 | |||||||| | || || || | ||| ||||||||| || |||||||| || Sbjct 87 TTGCCTGCATCAGTCGTTGCCTGACGTTGGTTGCTGTTAAAATACGCCGGAACAGTGATC 146 Query 282467 ACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAA 282526 || |||||||| || || || ||||||| |||||| | ||||| | | Sbjct 147 ACAGCATCTGTCACCCTCTTGCCCGTATAAGCTTCTGCTGTCTTCTTCATCTCCAGCAGC 206 Query 282527 ATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGAT---ACT 282583 | ||| || || || | |||| || | |||| || | ||||| | | | ||| Sbjct 207 ACCATAGACGAGATCTCCTCTGCAGTAAATTGTTTTG--TCATTCC-ACAGCACCTCACT 263 Query 282584 TCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGAT 282643 |||| | || || ||| || | || ||||||||||| | ||||||| | Sbjct 264 TCAACCTTCGGCTTTTTATTGGAGTTTACCACCTTAAATGGCCAGTGCATCATATCACTT 323 Query 282644 TGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTG 282703 || || | |||||| || | || || | || ||| ||||| ||| ||||| Sbjct 324 TGCACTGCCTCGTCATTGAAGCGACGTCCGATCAGGCGCTTTACATCATAAACTGTATTC 383 Query 282704 GTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTA 282763 || ||||| | ||||| || | || |||||||| || || || | || | || || Sbjct 384 GTGGGATTCATGGCAGCCTGGTTCTTTGCTGCATCACCGATGAGGAGCTCCTTATCCGTG 443 Query 282764 AATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTA 282823 |||| || || || || |||| | ||| || |||| || || |||||||| || Sbjct 444 AATGCGACGTAGCTCGGTGTCTTGCGGTCACCCTGGCCATTGGCGATGATTTCAACCTTG 503 Query 282824 CCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 || | ||| | ||||| || || || | ||||| || |||||||||||||| Sbjct 504 CCGTCTTGAAAAACACCGACGCACGAGAAGGCGGTTCCCAAGTCAATACCAATAGC 559 >seq7919 Length=65517 Score = 122 bits (134), Expect = 7e-22 Identities = 395/606 (65%), Gaps = 8/606 (1%) Strand=Plus/Plus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 ||||| |||||||||||||| |||| | | ||| ||||| | || | | Sbjct 63292 ACATCGAAGGTTCCACCACCCAAATCATAGACAAGCACATTGCGCTGCATGCCGGAGGCC 63351 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 | || | ||| || |||| || || || || || ||||| | | | ||| ||||| Sbjct 63352 CTGTCCAAACCGTATGCAATGGCGGCTGCTGTGGGCTCATTGACGACGCGCAACACATTT 63411 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | ||| || ||||||||||||||| | || || || | || ||| || || ||||| Sbjct 63412 AAACCTGCTATTCTTCCTGCATCTATCGTCGCCTGCCGCTGGCTATCATTGAAGTATGCC 63471 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || || || || || |||||| | || || || | ||| || ||||| | | ||| Sbjct 63472 GGTACTGTTATTACCGCATCTCTCACCTCCCCGCCCAAATATGCCTTTGCTATCTCCTTC 63531 Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-AATATTGCTTGGATTCATTTTG 282573 || || | | ||| |||||||| | || | | || | | ||| | || | | Sbjct 63532 ATCTTCAGCAGCACCATGGATGAAATCTCCTCGGCAACAAAAGTTCTTTTCT-CACTACG 63590 Query 282574 ATATGATACTTCAAA-ATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATT 282632 ||| || |||| || | || | | | ||| || ||||| |||||||||| | Sbjct 63591 ATACTCCACCTCAATCATCGGCTTCCCTTTCGA-ATTGATGACTTTGAATGGCCAATGCT 63649 Query 282633 TCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690 |||| || ||| |||| | ||||| ||| | || || | ||||| ||||| Sbjct 63650 TCATGTCGTCTTG--CACTGCCGCATCATTGAAACGGCGTCCGATCATGCGTTTCGCATC 63707 Query 282691 AAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 282750 |||| |||||| ||||||| | || ||||| | || || ||||| ||||| || | Sbjct 63708 GAAAACTGTATTGTTTGGATTGAGAGCCGCTTGGTTCTTAGCGGCATCACCAATGAGCCG 63767 Query 282751 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 282810 |||| | | || || | ||||| || || ||||| |||||||| || || || Sbjct 63768 TTCTTTATTGGTGAAGGCGACATAGCTGGGCGTCGTGCGGAAGCCTTGATCGTTGGCGAT 63827 Query 282811 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 282870 ||||| || || || | | || || || || |||||||||| | |||||| Sbjct 63828 GATTTCCACCTTGCCGCGATAAAAGACTCCAACGCACGAGTAAGTTGTTCCCAGATCAAT 63887 Query 282871 ACCAAT 282876 |||||| Sbjct 63888 ACCAAT 63893 >seq6391 Length=79790 Score = 122 bits (134), Expect = 7e-22 Identities = 395/606 (65%), Gaps = 8/606 (1%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 ||||| |||||||||||||| |||| | | ||| ||||| | || | | Sbjct 13267 ACATCGAAGGTTCCACCACCCAAATCATAGACAAGCACATTGCGCTGCATGCCGGAGGCC 13208 Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 | || | ||| || |||| || || || || || ||||| | | | ||| ||||| Sbjct 13207 CTGTCCAAACCGTATGCAATGGCGGCTGCTGTGGGCTCATTGACGACGCGCAACACATTT 13148 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | ||| || ||||||||||||||| | || || || | || ||| || || ||||| Sbjct 13147 AAACCTGCTATTCTTCCTGCATCTATCGTCGCCTGCCGCTGGCTATCATTGAAGTATGCC 13088 Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514 || || || || || |||||| | || || || | ||| || ||||| | | ||| Sbjct 13087 GGTACTGTTATTACCGCATCTCTCACCTCCCCGCCCAAATATGCCTTTGCTATCTCCTTC 13028 Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-AATATTGCTTGGATTCATTTTG 282573 || || | | ||| |||||||| | || | | || | | ||| | || | | Sbjct 13027 ATCTTCAGCAGCACCATGGATGAAATCTCCTCGGCAACAAAAGTTCTTTTCT-CACTACG 12969 Query 282574 ATATGATACTTCAAA-ATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATT 282632 ||| || |||| || | || | | | ||| || ||||| |||||||||| | Sbjct 12968 ATACTCCACCTCAATCATCGGCTTCCCTTTCGA-ATTGATGACTTTGAATGGCCAATGCT 12910 Query 282633 TCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690 |||| || ||| |||| | ||||| ||| | || || | ||||| ||||| Sbjct 12909 TCATGTCGTCTTG--CACTGCCGCATCATTGAAACGGCGTCCGATCATGCGTTTCGCATC 12852 Query 282691 AAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 282750 |||| |||||| ||||||| | || ||||| | || || ||||| ||||| || | Sbjct 12851 GAAAACTGTATTGTTTGGATTGAGAGCCGCTTGGTTCTTAGCGGCATCACCAATGAGCCG 12792 Query 282751 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 282810 |||| | | || || | ||||| || || ||||| |||||||| || || || Sbjct 12791 TTCTTTATTGGTGAAGGCGACATAGCTGGGCGTCGTGCGGAAGCCTTGATCGTTGGCGAT 12732 Query 282811 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 282870 ||||| || || || | | || || || || |||||||||| | |||||| Sbjct 12731 GATTTCCACCTTGCCGCGATAAAAGACTCCAACGCACGAGTAAGTTGTTCCCAGATCAAT 12672 Query 282871 ACCAAT 282876 |||||| Sbjct 12671 ACCAAT 12666 >seq5573 Length=3469 Score = 116 bits (128), Expect = 3e-20 Identities = 393/607 (65%), Gaps = 4/607 (1%) Strand=Plus/Plus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 ||||| |||| |||||||||| ||| || || ||||| || | | |||| | | Sbjct 278 ACATCGAGGGTACCACCACCCAAATCGAAGATGAGTACGTTGCTCTGCCTGTCAAGTCTC 337 Query 282335 TTA-TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393 | |||| ||| || |||| |||||| || || || |||||||| || | || ||||| Sbjct 338 CTGCTCAA-ACCGTAGGCAAGAGCAGCTGCTGTAGGCTCATTAATGATGCGCATCACATT 396 Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453 | || || ||| | | || || | || || | | ||| ||| |||||||| || Sbjct 397 CAAGCCCGCTATTTTGCTAGCGTCAATCGTCGCCTTCCGTTGGCTATCATTAAAATAAGC 456 Query 282454 AGGAACAGTAATAACGGCATCTGTTAC-TTCTTTTCCAATATAAGCGCTTGCTGTTTGTT 282512 || || || ||||| |||| | || |||| |||| |||||| |||| | | | Sbjct 457 CGGCACTGTGATAACTGCATTTACCACCTTCTCGCCCAA-ATAAGCTTCTGCTATCTTCT 515 Query 282513 TCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTT 282572 |||||| | | ||| || ||||| | || | || |||| || | | | Sbjct 516 TCATTTCCAGCAGCACCATGGACGAAATCTCCTCCGCAGTGAATTGTTTTGTCTTACCAC 575 Query 282573 GATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATT 282632 || |||||||| | || || | || | | || || |||||||| | | Sbjct 576 AGTACCTTACTTCAACCTTCGGCTTTCCATCAGAGTCTGTCACCTTGAATGGCCAGTTCT 635 Query 282633 TCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAA 282692 || || ||| || || ||| | | | | || || | || ||| ||||| Sbjct 636 CAATGTCGCTTTGCACTTCTTCATCAATGAGGTAACGTCCGATCAGGCGCTTTACATCAT 695 Query 282693 AAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTT 282752 ||| ||||| || ||||| | ||||| || | || || ||||| ||||| || | | Sbjct 696 AAACCGTATTCGTGGGATTCATGGCAGCCTGGTTCTTTGCGGCATCGCCAATGAGGAGCT 755 Query 282753 CTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAA 282812 || | || || |||| || || || ||| |||| | ||| || |||| || || | Sbjct 756 CTTTATCCGTGAATGCGACGTAACTCGGTGTTTTGCGGTCACCCTGGCCATTGGCGATGA 815 Query 282813 TTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATAC 282872 ||||||| || || | ||| | || || |||||| || || ||||| || ||||||| Sbjct 816 TTTCAACCTTGCCGTCTTGAAAAACGCCGACACAAGAGAAGGTGGTTCCCAAGTCAATAC 875 Query 282873 CAATAGC 282879 ||||||| Sbjct 876 CAATAGC 882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739985723391606