Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq6307 223 3e-52
seq8799 172 4e-37
seq12962 168 5e-36
seq3685 140 2e-27
seq5041 138 8e-27
seq9595 129 4e-24
seq7919 122 7e-22
seq6391 122 7e-22
seq5573 116 3e-20
>seq6307
Length=230001
Score = 223 bits (246), Expect = 3e-52
Identities = 414/605 (68%), Gaps = 2/605 (0%)
Strand=Plus/Minus
Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334
||||| ||| ||||| |||| ||||||||| || ||||| | | |||| ||
Sbjct 29864 ACATCGAAGGTGCCACCGCCCAAATCAAAAATGAGCACATTGCTCTGCCTGTCAACCTTC 29805
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
|| || | | || |||| |||||||| ||||| ||||||||||| | || |||||
Sbjct 29804 TTGTCCAAGCTGTAGGCAATGGCAGCAGCCGTTGGCTCATTAATAATGCGTAATACATTC 29745
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
| |||||| ||| ||||||| || | || ||||| | || ||| || ||||| ||
Sbjct 29744 AAACCAGCGATTTTTCCTGCGTCCATCGTCGCTTGACACTGGCTATCATTGAAATACGCT 29685
Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514
|| || || || || || | ||| ||||| || || | |||||| || |||| |||
Sbjct 29684 GGTACCGTGATCACCGCGTTTGTCACTTCCTTGCCCAAATAAGCTTCCGCCGTTTCCTTC 29625
Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGA 282574
||||| | | | ||| | || || | || ||| | ||||| | ||| |
Sbjct 29624 ATTTTCATAAGCACCATAGCCGAGATCTCCTCCGGAACGAACTGCTT-TACTCACCGCGG 29566
Query 282575 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTC 282634
|| ||| || || |||||||| | ||| ||| | |||||||| ||||| || |||
Sbjct 29565 TACTCTACCTC-AATTATGGTTTCCTTCCAGAATTTACCACTTTAAACGGCCAGTACTTC 29507
Query 282635 ATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAA 282694
||||| ||| || | | |||||| |||| | ||||| | || || | ||||||
Sbjct 29506 ATATCACCTTGCACTGTCTTGTCATTGAAATAACGTCCAATCAGACGCTTCACGTCAAAA 29447
Query 282695 ATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCT 282754
| || || || || || | || || |||| || || | ||| || || ||| |||||
Sbjct 29446 ACCGTGTTAGTCGGGTTCAGAGCTGCCTGATTCTTTGCAGAATCACCGATAAGAGGTTCT 29387
Query 282755 GTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATT 282814
| || || || | ||||| || ||||| |||| ||||||||| || ||||| |||
Sbjct 29386 TTTTCCGTGAAGGCCACATAACTGGGCGTTGTTCGATAACCTTGATCGTTGGCAATTATT 29327
Query 282815 TCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 282874
|| || || || | ||| | ||||| ||||| |||||||| ||||| || || |||
Sbjct 29326 TCTACCTTGCCGTCTTGAAAGACACCAACACACGAGAAAGTTGTGCCTAAGTCGATGCCA 29267
Query 282875 ATAGC 282879
|| ||
Sbjct 29266 ATGGC 29262
>seq8799
Length=129867
Score = 172 bits (190), Expect = 4e-37
Identities = 401/605 (66%), Gaps = 0/605 (0%)
Strand=Plus/Minus
Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334
||||| ||| || || |||| || ||||| || || || || ||| || ||
Sbjct 11431 ACATCGAAGGTACCCCCGCCCAAGTCGAAAATGAGCACGTTGCGCTCCTTGCCTACCTTC 11372
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
||||| | || || || | || || || || || ||||||||||| | ||| |||||
Sbjct 11371 TTATCCAAGCCGTAGGCGATGGCGGCTGCTGTCGGCTCATTAATAATACGCAATACATTC 11312
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
| || | || | |||||||| || || || || | || ||||| || || ||
Sbjct 11311 ATGCCTGATATCGTGCCTGCATCCTTCGTTGCCTGACGCTGACTGTCGTTGAAGTAAGCC 11252
Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514
|| || || || || ||||| ||||| | ||| || | || || ||| |||| |||
Sbjct 11251 GGCACCGTGATGACCGCATCAGTTACCTTTTTGCCCAAGTACGCCTCTGCAGTTTCCTTC 11192
Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGA 282574
||||| || | ||| || || |||| || | ||||||||| ||| ||
Sbjct 11191 ATTTTTAGTAGTACCATGGACGAGATTTCCTCCGCGCTGAATTGCTTGGTCTCACCACGA 11132
Query 282575 TATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTC 282634
|| |||||||| | || || || ||| || |||||||| ||||||| |||
Sbjct 11131 TACTCTACTTCAATCTTCGGCTTGCCTCCCGAATTGATCACTTTAAAGGGCCAATGCTTC 11072
Query 282635 ATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAA 282694
|| || ||| || | | ||| | |||| | ||||| || ||||| ||||| ||
Sbjct 11071 ATGTCACTTTGCACCGTCTTGTCTTCAAAACGACGTCCAATCAAGCGTTTGGCATCGAAC 11012
Query 282695 ATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCT 282754
| || ||| | ||||| | || | |||| || || ||||| ||||| ||| | |||
Sbjct 11011 ACCGTGTTGCTAGGATTCATGGCTACCTGATTCTTAGCAGCATCACCAATGAGACGCTCT 10952
Query 282755 GTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATT 282814
|| || ||||| | ||||| || || || ||||| || || ||||| || || ||
Sbjct 10951 GTATCCGTAAAGGCGACATAACTCGGTGTAGTACGATTGCCCTGGTCATTGGCGATTATC 10892
Query 282815 TCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCA 282874
|| || || |||| ||| | || || || || ||||| || || ||||| |||||
Sbjct 10891 TCCACCTTGCCATGTTGAAACACGCCAACGCAGGAGAAAGTCGTCCCCAAATCGATACCG 10832
Query 282875 ATAGC 282879
| |||
Sbjct 10831 ACAGC 10827
>seq12962
Length=275956
Score = 168 bits (186), Expect = 5e-36
Identities = 445/670 (66%), Gaps = 16/670 (2%)
Strand=Plus/Plus
Query 282184 AAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTG 282243
|||||| | |||||| |||||||| || | | ||| | || || || ||||
Sbjct 129687 AAGACGCTGATCAAAGTCTTCACCACCAAGATGAGTGTCACCACTGGTCGCAACAACTTC 129746
Query 282244 GAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAA 282303
|| | |||| || | | || || | ||||| ||| |||||||||| ||||||
Sbjct 129747 AAACACACCATTGTCGATTGTCAGGAGGGAGACATCGAAGGTGCCACCACCCAGATCAAA 129806
Query 282304 AATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGC 282363
| || | |||| |||| |||||| |||| || | ||||| || | ||||| ||
Sbjct 129807 CACGAGGATATTCTTTTCAGTGTCTT---TTTTGTCCAACCCATAGGCGATCGCAGCTGC 129863
Query 282364 AGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 282423
||||||||||| ||||| | ||| || | ||||||||||| || |||||||||||
Sbjct 129864 GGTTGGTTCATTGATAATCCGCAACACGGTCAGACCAGCAATGGCACCAGCATCTTTAGT 129923
Query 282424 GGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTC 282483
||||| | ||| | || || || || ||||| ||||| | ||| |||| || ||| |
Sbjct 129924 TGCTTGACGTTGGGCGTCATTGAAGTAGGCAGGCACAGTGACAACAGCATGCGTAACTGC 129983
Query 282484 TTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTG 282543
| |||| ||| || || ||| ||||||||||| | || ||| | |||| |
Sbjct 129984 AGTGCCAAGATAGGCCTCAGCAATTTCCTTCATTTTACTAAGAACCATAGCCGAAACCTC 130043
Query 282544 TTCTGGAG---AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATT 282600
|| || | | || || | | | | ||| |||| | ||| ||||| ||
Sbjct 130044 CTCGGGGGCGAACCCTTTCT--CCTCCGTCCCTACTTGA-ACTTGCATATACGGTTTGTT 130100
Query 282601 ACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATT 282660
| || || ||||| || || | ||| ||||| ||| ||| || || |
Sbjct 130101 ATTCTTGTTGATCACTTTGAACGGGTAGCGTTTGATATCACTTTGCACATCTTTATCGTC 130160
Query 282661 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT--AACTGCA 282718
| |||| | ||| || | ||||| || ||||| | |||||| | ||||| || | ||
Sbjct 130161 ATAATCACGACCGATGAGACGTTTGGCGTCAAACAAAGTATTCTTAGGATTCGAAGT-CA 130219
Query 282719 GCTTGATATTTGGCTGCATCTCCAATCAGATGTT--CTGTC-TCTGTAAATGAAACATAT 282775
||||| ||| || || || |||||||| ||| | ||| | | || | ||||||
Sbjct 130220 -ATTGATTTTTTGCAGCGTCACCAATCAGTCGTTCACCGTCACCAGAGAAGGCAACATAA 130278
Query 282776 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT 282835
||||| ||| | || || |||||||| || | ||| |||||||| || |||| |
Sbjct 130279 GATGGGGTTATTCGGTTGCCTTGATCGTTTGTAATGATTTCAACACGTCCGTTTTTGAAA 130338
Query 282836 ACACCTACAC 282845
||||| ||||
Sbjct 130339 ACACCAACAC 130348
Score = 120 bits (132), Expect = 2e-21
Identities = 270/405 (67%), Gaps = 12/405 (3%)
Strand=Plus/Plus
Query 281437 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 281496
|||||||||||| |||| | || || || |||||||||||||| | || | ||||
Sbjct 128946 AAGAATACCATTTACATCAATTTCGAAGGTAACTTCAATTTGAGGTAAACCACGAGGAGC 129005
Query 281497 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 281556
|| || || ||| ||||| || | |||||| || ||| |||||||| | | ||
Sbjct 129006 CGGCGGAATGCCTGTCAAATCGAACTTGCCCAGAAAATGATTGTCTTTAGTCATTGGACG 129065
Query 281557 TTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAATAAGTTGTAAA 281613
||||||||||| | || ||||| |||||| ||||| || | ||| | |||
Sbjct 129066 CTCACCCTCGAATACCTGAATAGT---GACAGTTGGCTGATTGTCGGCGGCAGTCGAAAA 129122
Query 281614 TACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 281673
| | |||||||| ||||| || ||||| ||||| |||||||||| |||
Sbjct 129123 GATTTGCGATTTTTTGGTGGGAATGACAGTATTTCTGGGAATAAGTTTGGTCATAACACC 129182
Query 281674 ACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAG 281733
||| | || || | ||| | || | || ||||| | || || |||| |
Sbjct 129183 CCCAACAGTCTCAATACCCATAGTCAATGGGCAAACATCGAGGAGCACGATATCACCAGT 129242
Query 281734 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793
| |||| | ||| || || | | ||||| | ||||||||||| ||||||||
Sbjct 129243 GTCTTCAAC------ACCGCTAATAACACCAGCTTGCACTGCAGCACCATAAGCAACAGC 129296
Query 281794 TTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 281838
|||||| || |||| | | | || ||| ||| ||||| || ||
Sbjct 129297 TTCATCGGGGTTAATACCTCTACTTGGTTCTTTGCCATTAAAGAA 129341
>seq3685
Length=2685
Score = 140 bits (154), Expect = 2e-27
Identities = 407/625 (65%), Gaps = 4/625 (1%)
Strand=Plus/Minus
Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316
|||| ||||||| | || ||| || || ||||||| ||| || | || |||||
Sbjct 2565 TCAATGGACAAAATGGACACGTCAAAAGTGCCGCCACCCAAATCGAAGACGAGCACATTG 2506
Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376
| | ||| || | |||| || || |||| |||||| || ||||| |||||
Sbjct 2505 TGCTGCTCGTCACTCTTCCTGTCAAAGCCGTAGGCAATAGCAGCTGCTGTTGGCTCATTG 2446
Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436
|||| | || ||||| | || || | ||||||||||||| | |||| || | |||
Sbjct 2445 ATAAGACGCATCACATTTAAGCCCGCCAATCTTCCTGCATCTATTTTGGCCTGCCGTTGA 2386
Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496
| | ||||| || || || || || | || || |||||||| || || || | |||
Sbjct 2385 TTAACATTAAAGTACGCTGGCACTGTGACTACCGCGTCTGTTACCTCCTTGCCCAAATAC 2326
Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556
| ||||| | ||||| || | | ||| ||||| || ||||||| | |
Sbjct 2325 ACCTCTGCTGCCTCCTTCATCTTCGACAGCACCATAGATGAGATCTGTTCTGCAATGAAA 2266
Query 282557 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 282616
||||| | | || || |||| |||| | ||| | | || ||||| | |||
Sbjct 2265 TGCTTTGCCTTGCCGCGAAATTATACCTCAATCTTCGGTATCTCTCCCACATTTACGACT 2206
Query 282617 TTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 282676
|| |||||||| | || || | ||| || || || | || | || ||
Sbjct 2205 TTGAATGGCCAGTGCTTAATGCTTTCTTGCACTGCTTCATCGTCGAAGCGACGTCCTATC 2146
Query 282677 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCA 282736
| || ||| ||| |||| |||||||| || || | ||| ||| | | || || ||
Sbjct 2145 AGACGCTTTATATCGAAAACGGTATTGGTGGGGTTTAGTGCTGCTCGGTTCTTTGCGGCC 2086
Query 282737 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 282796
|| || || ||| ||| | | ||| || | | ||| || ||||| || ||||
Sbjct 2085 TCACCGATGAGACATTCATTGTTTGTGAAGGCTATATAACTGGGTGTTGTTCGGGAACCT 2026
Query 282797 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG-- 282854
||||| || ||||||||||| || |||||||||| | ||||| ||||| | | |
Sbjct 2025 TGATCGTTGGCAATAATTTCCACCATACCATTTTGAAACACACCAACACA--TGAGCGGA 1968
Query 282855 TTGTTCCTAAATCAATACCAATAGC 282879
|||||| |||||||| || |||||
Sbjct 1967 CTGTTCCCAAATCAATGCCGATAGC 1943
>seq5041
Length=10072
Score = 138 bits (152), Expect = 8e-27
Identities = 404/623 (65%), Gaps = 0/623 (0%)
Strand=Plus/Minus
Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316
|||| ||||||| | |||||| || || ||||||| ||| || | || |||||
Sbjct 654 TCAATGGACAAAATGGACACATCAAAAGTGCCGCCACCCAAATCGAAGACGAGCACATTG 595
Query 282317 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 282376
| | ||| || | || | || || |||| |||||| || ||||| |||||
Sbjct 594 CGCTGCTCGTCGCTCTTCCTGTCTAAGCCGTAGGCAATAGCAGCTGCTGTTGGCTCATTG 535
Query 282377 ATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGT 282436
|||| | || ||||| | || || | ||||||||||||| | ||||| || | |||
Sbjct 534 ATAAGACGCATCACATTTAAGCCCGCCAATCTTCCTGCATCTATTGTGGCCTGCCGTTGA 475
Query 282437 GAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAA 282496
| | ||||| || || || || || || || || |||||||| || || || | |||
Sbjct 474 TTAACATTAAAGTACGCTGGCACTGTGATTACCGCGTCTGTTACCTCCTTGCCCAAATAC 415
Query 282497 GCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATAT 282556
|| ||||| | ||||| || | | ||| ||||| || ||||||| | |
Sbjct 414 GCCTCTGCTGCCTCCTTCATCTTCGACAGCACCATAGATGAGATCTGTTCTGCAATGAAA 355
Query 282557 TGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACT 282616
|||| | | | || ||| |||| | ||| | | || ||||| | |||
Sbjct 354 TGCTCTGCCTTGCCGCCAAATTGTACCTCAATCTTCGGTATCTCTCCCACATTTACGACT 295
Query 282617 TTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 282676
|| |||||||| | || || | ||| || || || | || | || |||
Sbjct 294 TTGAATGGCCAGTGCTTAATGCTTTCTTGCACTGCTTCATCGTCGAAGCGACGTCCTATT 235
Query 282677 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCA 282736
| | ||| ||| |||| |||||||| || || | ||| || || | || || ||
Sbjct 234 AGACACTTTATATCGAAAACGGTATTGGTGGGGTTTAGTGCTGCCTGGTTCTTTGCGGCC 175
Query 282737 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 282796
|| || || ||| | || | ||||| || | ||||| || ||||| || ||||
Sbjct 174 TCACCGATGAGACGNTCATTGTCTGTGAAGGCTACATAACTGGGTGTTGTTCGGGAACCT 115
Query 282797 TGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTT 282856
||||| | || |||||||| || | |||||||| | ||||| ||||| | |
Sbjct 114 TGATCGNTGGCGATAATTTCCACCCTGCCATTTTGAAACACACCAACACATGAGCAGACT 55
Query 282857 GTTCCTAAATCAATACCAATAGC 282879
||||| |||||||| || |||||
Sbjct 54 GTTCCCAAATCAATGCCGATAGC 32
>seq9595
Length=4027
Score = 129 bits (142), Expect = 4e-24
Identities = 352/536 (66%), Gaps = 6/536 (1%)
Strand=Plus/Plus
Query 282347 TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATT 282406
|| |||| |||||| || ||||| ||| | | || | || ||||| | ||| ||||||
Sbjct 27 TAGGCAAGAGCAGCTGCCGTTGGCTCACTGACGATGCGCATCACATTCAAACCCGCAATT 86
Query 282407 CTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATA 282466
| |||||||| | || || || | ||| ||||||||| || |||||||| ||
Sbjct 87 TTGCCTGCATCAGTCGTTGCCTGACGTTGGTTGCTGTTAAAATACGCCGGAACAGTGATC 146
Query 282467 ACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAA 282526
|| |||||||| || || || ||||||| |||||| | ||||| | |
Sbjct 147 ACAGCATCTGTCACCCTCTTGCCCGTATAAGCTTCTGCTGTCTTCTTCATCTCCAGCAGC 206
Query 282527 ATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGAT---ACT 282583
| ||| || || || | |||| || | |||| || | ||||| | | | |||
Sbjct 207 ACCATAGACGAGATCTCCTCTGCAGTAAATTGTTTTG--TCATTCC-ACAGCACCTCACT 263
Query 282584 TCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGAT 282643
|||| | || || ||| || | || ||||||||||| | ||||||| |
Sbjct 264 TCAACCTTCGGCTTTTTATTGGAGTTTACCACCTTAAATGGCCAGTGCATCATATCACTT 323
Query 282644 TGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTG 282703
|| || | |||||| || | || || | || ||| ||||| ||| |||||
Sbjct 324 TGCACTGCCTCGTCATTGAAGCGACGTCCGATCAGGCGCTTTACATCATAAACTGTATTC 383
Query 282704 GTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTA 282763
|| ||||| | ||||| || | || |||||||| || || || | || | || ||
Sbjct 384 GTGGGATTCATGGCAGCCTGGTTCTTTGCTGCATCACCGATGAGGAGCTCCTTATCCGTG 443
Query 282764 AATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTA 282823
|||| || || || || |||| | ||| || |||| || || |||||||| ||
Sbjct 444 AATGCGACGTAGCTCGGTGTCTTGCGGTCACCCTGGCCATTGGCGATGATTTCAACCTTG 503
Query 282824 CCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879
|| | ||| | ||||| || || || | ||||| || ||||||||||||||
Sbjct 504 CCGTCTTGAAAAACACCGACGCACGAGAAGGCGGTTCCCAAGTCAATACCAATAGC 559
>seq7919
Length=65517
Score = 122 bits (134), Expect = 7e-22
Identities = 395/606 (65%), Gaps = 8/606 (1%)
Strand=Plus/Plus
Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334
||||| |||||||||||||| |||| | | ||| ||||| | || | |
Sbjct 63292 ACATCGAAGGTTCCACCACCCAAATCATAGACAAGCACATTGCGCTGCATGCCGGAGGCC 63351
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
| || | ||| || |||| || || || || || ||||| | | | ||| |||||
Sbjct 63352 CTGTCCAAACCGTATGCAATGGCGGCTGCTGTGGGCTCATTGACGACGCGCAACACATTT 63411
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
| ||| || ||||||||||||||| | || || || | || ||| || || |||||
Sbjct 63412 AAACCTGCTATTCTTCCTGCATCTATCGTCGCCTGCCGCTGGCTATCATTGAAGTATGCC 63471
Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514
|| || || || || |||||| | || || || | ||| || ||||| | | |||
Sbjct 63472 GGTACTGTTATTACCGCATCTCTCACCTCCCCGCCCAAATATGCCTTTGCTATCTCCTTC 63531
Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-AATATTGCTTGGATTCATTTTG 282573
|| || | | ||| |||||||| | || | | || | | ||| | || | |
Sbjct 63532 ATCTTCAGCAGCACCATGGATGAAATCTCCTCGGCAACAAAAGTTCTTTTCT-CACTACG 63590
Query 282574 ATATGATACTTCAAA-ATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATT 282632
||| || |||| || | || | | | ||| || ||||| |||||||||| |
Sbjct 63591 ATACTCCACCTCAATCATCGGCTTCCCTTTCGA-ATTGATGACTTTGAATGGCCAATGCT 63649
Query 282633 TCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690
|||| || ||| |||| | ||||| ||| | || || | ||||| |||||
Sbjct 63650 TCATGTCGTCTTG--CACTGCCGCATCATTGAAACGGCGTCCGATCATGCGTTTCGCATC 63707
Query 282691 AAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 282750
|||| |||||| ||||||| | || ||||| | || || ||||| ||||| || |
Sbjct 63708 GAAAACTGTATTGTTTGGATTGAGAGCCGCTTGGTTCTTAGCGGCATCACCAATGAGCCG 63767
Query 282751 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 282810
|||| | | || || | ||||| || || ||||| |||||||| || || ||
Sbjct 63768 TTCTTTATTGGTGAAGGCGACATAGCTGGGCGTCGTGCGGAAGCCTTGATCGTTGGCGAT 63827
Query 282811 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 282870
||||| || || || | | || || || || |||||||||| | ||||||
Sbjct 63828 GATTTCCACCTTGCCGCGATAAAAGACTCCAACGCACGAGTAAGTTGTTCCCAGATCAAT 63887
Query 282871 ACCAAT 282876
||||||
Sbjct 63888 ACCAAT 63893
>seq6391
Length=79790
Score = 122 bits (134), Expect = 7e-22
Identities = 395/606 (65%), Gaps = 8/606 (1%)
Strand=Plus/Minus
Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334
||||| |||||||||||||| |||| | | ||| ||||| | || | |
Sbjct 13267 ACATCGAAGGTTCCACCACCCAAATCATAGACAAGCACATTGCGCTGCATGCCGGAGGCC 13208
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
| || | ||| || |||| || || || || || ||||| | | | ||| |||||
Sbjct 13207 CTGTCCAAACCGTATGCAATGGCGGCTGCTGTGGGCTCATTGACGACGCGCAACACATTT 13148
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
| ||| || ||||||||||||||| | || || || | || ||| || || |||||
Sbjct 13147 AAACCTGCTATTCTTCCTGCATCTATCGTCGCCTGCCGCTGGCTATCATTGAAGTATGCC 13088
Query 282455 GGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTC 282514
|| || || || || |||||| | || || || | ||| || ||||| | | |||
Sbjct 13087 GGTACTGTTATTACCGCATCTCTCACCTCCCCGCCCAAATATGCCTTTGCTATCTCCTTC 13028
Query 282515 ATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-AATATTGCTTGGATTCATTTTG 282573
|| || | | ||| |||||||| | || | | || | | ||| | || | |
Sbjct 13027 ATCTTCAGCAGCACCATGGATGAAATCTCCTCGGCAACAAAAGTTCTTTTCT-CACTACG 12969
Query 282574 ATATGATACTTCAAA-ATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATT 282632
||| || |||| || | || | | | ||| || ||||| |||||||||| |
Sbjct 12968 ATACTCCACCTCAATCATCGGCTTCCCTTTCGA-ATTGATGACTTTGAATGGCCAATGCT 12910
Query 282633 TCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 282690
|||| || ||| |||| | ||||| ||| | || || | ||||| |||||
Sbjct 12909 TCATGTCGTCTTG--CACTGCCGCATCATTGAAACGGCGTCCGATCATGCGTTTCGCATC 12852
Query 282691 AAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATG 282750
|||| |||||| ||||||| | || ||||| | || || ||||| ||||| || |
Sbjct 12851 GAAAACTGTATTGTTTGGATTGAGAGCCGCTTGGTTCTTAGCGGCATCACCAATGAGCCG 12792
Query 282751 TTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAAT 282810
|||| | | || || | ||||| || || ||||| |||||||| || || ||
Sbjct 12791 TTCTTTATTGGTGAAGGCGACATAGCTGGGCGTCGTGCGGAAGCCTTGATCGTTGGCGAT 12732
Query 282811 AATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 282870
||||| || || || | | || || || || |||||||||| | ||||||
Sbjct 12731 GATTTCCACCTTGCCGCGATAAAAGACTCCAACGCACGAGTAAGTTGTTCCCAGATCAAT 12672
Query 282871 ACCAAT 282876
||||||
Sbjct 12671 ACCAAT 12666
>seq5573
Length=3469
Score = 116 bits (128), Expect = 3e-20
Identities = 393/607 (65%), Gaps = 4/607 (1%)
Strand=Plus/Plus
Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334
||||| |||| |||||||||| ||| || || ||||| || | | |||| | |
Sbjct 278 ACATCGAGGGTACCACCACCCAAATCGAAGATGAGTACGTTGCTCTGCCTGTCAAGTCTC 337
Query 282335 TTA-TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393
| |||| ||| || |||| |||||| || || || |||||||| || | || |||||
Sbjct 338 CTGCTCAA-ACCGTAGGCAAGAGCAGCTGCTGTAGGCTCATTAATGATGCGCATCACATT 396
Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453
| || || ||| | | || || | || || | | ||| ||| |||||||| ||
Sbjct 397 CAAGCCCGCTATTTTGCTAGCGTCAATCGTCGCCTTCCGTTGGCTATCATTAAAATAAGC 456
Query 282454 AGGAACAGTAATAACGGCATCTGTTAC-TTCTTTTCCAATATAAGCGCTTGCTGTTTGTT 282512
|| || || ||||| |||| | || |||| |||| |||||| |||| | | |
Sbjct 457 CGGCACTGTGATAACTGCATTTACCACCTTCTCGCCCAA-ATAAGCTTCTGCTATCTTCT 515
Query 282513 TCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTT 282572
|||||| | | ||| || ||||| | || | || |||| || | | |
Sbjct 516 TCATTTCCAGCAGCACCATGGACGAAATCTCCTCCGCAGTGAATTGTTTTGTCTTACCAC 575
Query 282573 GATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATT 282632
|| |||||||| | || || | || | | || || |||||||| | |
Sbjct 576 AGTACCTTACTTCAACCTTCGGCTTTCCATCAGAGTCTGTCACCTTGAATGGCCAGTTCT 635
Query 282633 TCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAA 282692
|| || ||| || || ||| | | | | || || | || ||| |||||
Sbjct 636 CAATGTCGCTTTGCACTTCTTCATCAATGAGGTAACGTCCGATCAGGCGCTTTACATCAT 695
Query 282693 AAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTT 282752
||| ||||| || ||||| | ||||| || | || || ||||| ||||| || | |
Sbjct 696 AAACCGTATTCGTGGGATTCATGGCAGCCTGGTTCTTTGCGGCATCGCCAATGAGGAGCT 755
Query 282753 CTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAA 282812
|| | || || |||| || || || ||| |||| | ||| || |||| || || |
Sbjct 756 CTTTATCCGTGAATGCGACGTAACTCGGTGTTTTGCGGTCACCCTGGCCATTGGCGATGA 815
Query 282813 TTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATAC 282872
||||||| || || | ||| | || || |||||| || || ||||| || |||||||
Sbjct 816 TTTCAACCTTGCCGTCTTGAAAAACGCCGACACAAGAGAAGGTGGTTCCCAAGTCAATAC 875
Query 282873 CAATAGC 282879
|||||||
Sbjct 876 CAATAGC 882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3739985723391606
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |