Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq3339 84.2 7e-13
seq5772 82.4 2e-12
seq403 82.4 2e-12
seq770 78.8 3e-11
>seq3339
Length=3007
Score = 84.2 bits (92), Expect = 7e-13
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 2775 GTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
||||||||||||||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 2373 GTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGATCCCGGG 2431
>seq5772
Length=3625
Score = 82.4 bits (90), Expect = 2e-12
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
|||||||||||||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 407 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGAACCCGGG 464
>seq403
Length=824
Score = 82.4 bits (90), Expect = 2e-12
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
|||||||||||||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 513 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGAACCCGGG 456
>seq770
Length=328
Score = 78.8 bits (86), Expect = 3e-11
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833
|||||||| ||||||||| |||||||||||||||||| ||||| ||||| | ||||||
Sbjct 93 TAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAATGTCCCCGGTTCGAACCCGGG 36
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15847323675495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |