Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq11759 86.0 2e-11 >seq11759 Length=791511 Score = 86.0 bits (94), Expect = 2e-11 Identities = 105/142 (74%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 || || |||||| || || || || |||| || ||||| | || ||| || || Sbjct 466234 CTACGCCGAGCGTCTGGTGGCGTTCGCTGCCGTTGAAGGCGTATTCTTTTCTGGTTCATT 466175 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || ||||| |||||| | || |||||||| || |||| || || ||||||||||| | Sbjct 466174 T-GCTTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAATG 466116 Query 443819 AACTGATCAGTCGGGACGAGGG 443840 | ||||||||||| ||||| || Sbjct 466115 AGCTGATCAGTCGAGACGAAGG 466094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588068776862295