Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 113 6e-20
>seq11759
Length=791511
Score = 113 bits (124), Expect = 6e-20
Identities = 341/521 (65%), Gaps = 12/521 (2%)
Strand=Plus/Plus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| ||| |||||| || ||||| || ||| || ||||| ||| || ||
Sbjct 466076 GCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATCAGCTCATTACTAAAGGTGAGGCCA 466135
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
||||||||||| |||||||| | ||||||||| | | |||||| ||||| ||||| |
Sbjct 466136 GGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAATGAACCAGAAAAGAATACG 466195
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTAT---CA 130192
|| || || |||||||| | |||||||| || | || | | |||| ||| ||
Sbjct 466196 CCTTCAACGGCAGCGAACGCCACCAGACGCTCGGC---GTAGGGTGCCTTTTTATTTGCA 466252
Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252
| |||| | | |||||| | ||||| || | | |||||| | || || || || | |
Sbjct 466253 ATCCACCTAAGCGCCCAATCGGCCTTCTTAGCAACACACGGCAACGTTTGAATGGCGTTA 466312
Query 130253 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312
|| || | ||| |||||| |||| ||| |||| || || || || ||
Sbjct 466313 AACAGAAAGTCGCGTTCCATTGGATCCTTGACGTAGGTATCGATCAGAAGAGAGTACATT 466372
Query 130313 TCGCCATGGACCATTTCATTATGGC-ACT--GATACGCGTAGAAAGAGCGCGCTTCGCTT 130369
|| ||| | |||| | ||| ||| || | | || ||| | || || |||
Sbjct 466373 TCAGAATGAATGTTTTC--GACGGCGACTTGCATTC-CATAAAAACAACGAGCCTCGGGA 466429
Query 130370 ATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 130429
|| || ||||| | |||||| | | | ||| ||| ||| || ||||| |
Sbjct 466430 ATTTGAACCTCGTTACAAAAATTCAAAGTTAGATTTTCATTAACGATGCCATCACTGGCT 466489
Query 130430 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAG 130489
|| || || |||| || |||| ||||| | |||| || || ||| | | ||||
Sbjct 466490 GCGAAGAAAGCCAAGACATACGAAATGAAGTGACGTTCGCCATCATTAAGGCTTTCCCAG 466549
Query 130490 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|| |||||||||| ||||| || ||||| | |||||
Sbjct 466550 TCAGTGAGATCCTTCGCTAGATCAACTTCCTCAACCGTCCA 466590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618333691592360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |