Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 123 3e-23
>seq11759
Length=791511
Score = 123 bits (136), Expect = 3e-23
Identities = 370/565 (65%), Gaps = 11/565 (2%)
Strand=Plus/Minus
Query 59574 TACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAG 59633
|||| ||| | |||| | || ||||||||| | | || |||||| | || |||||
Sbjct 466635 TACCATGATATTTGGGAGTTCTACAAGAAAGCGGTTGCCTCTTTCTGGACGGTTGAGGAA 466576
Query 59634 ATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTC 59693
|||| || || || || | || ||||| | || ||| | | ||| | || |||
Sbjct 466575 GTTGATCTAGCGAAGGATCTCACTGACTGGGAAAGCCTTAATGATGGCGAACGTCACTTC 466516
Query 59694 ATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGAC 59753
|| | ||| |||| |||||||| || |||||||| || || | |||||| ||
Sbjct 466515 ATTTCGTATGTCTTGGCTTTCTTCGCAGCCAGTGATGGCATCGTTAATGAAAATCTAACT 466456
Query 59754 ATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATC--AGT 59811
|||| |||| || || || || ||| ||||||| || | || || | | || |||
Sbjct 466455 TTGAATTTTTGTAACGAGGTTCAAATTCCCGAGGCTCGTTGTTTTTATG-GAATGCAAGT 466397
Query 59812 CGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGG 59871
|| | ||| || || || || | |||||| || ||||||||| | |||||||
Sbjct 466396 CGC-CGTCGAAAACATTCATTCTGAAATGTACTCTCTTCTGATCGATACCTACGTCAAGG 466338
Query 59872 ATCCGGAAGAGAAGGC--TGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACA 59929
|||| || ||| || |||||| ||||| | |||| || ||| |
Sbjct 466337 ATCC--AATGGAACGCGACTTTCTGTTTAACGCCATTCAAACGTTGCCGTGTGTTGCTAA 466280
Query 59930 AAAAGCAGAATGGGCCATGCAGTGGAT---GAGTCCTGGAGCATCATTTGCACAACGTCT 59986
|| || || ||||| | |||||| | | ||| | | || | |||||
Sbjct 466279 GAAGGCCGATTGGGCGCTTAGGTGGATTGCAAATAAAAAGGCACCCTACGCCGAGCGTCT 466220
Query 59987 CATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTG 60046
| || || || ||| ||||| | ||||| ||||| || || | | ||||||||
Sbjct 466219 GGTGGCGTTCGCTGCCGTTGAAGGCGTATTCTTTTCTGGTTCATTTGCTTCCATTTTCTG 466160
Query 60047 GCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGA 60106
|||||| |||||||| |||||||| ||||| | || || |||||||| || ||
Sbjct 466159 GCTCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAATGAGCTGATCAGTCGAGA 466100
Query 60107 CGAGGGCCTCCATCAGGAGTTTGCA 60131
||| |||||||| ||| ||||||
Sbjct 466099 CGAAGGCCTCCACACGGATTTTGCA 466075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548434766510640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |