Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq7000 185 1e-41
seq1039 172 6e-38
seq7187 167 3e-36
seq11759 163 3e-35
seq7336 149 7e-31
seq1473 127 2e-24
seq5605 111 2e-19
>seq7000
Length=1252665
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || ||||||||||| ||||| ||||||||||| || |
Sbjct 319803 ATGCAGATTTTTGTGAAAACTCTTACCGGCAAAACTATCACTCTTGAGGTCGAACCTTCC 319744
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
||| |||| ||| |||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 319743 GATTCTATTGAGAATGTGAAGGCTAAGATTCAGGACAAGGAGGGGATTCCGCCAGACCAA 319684
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| ||||||||||| |||||| | ||||||| ||| || || | || || |||
Sbjct 319683 CAGCGTCTTATTTTTGCTGGCAAGCAATTGGAGGATGGACGTTCCTTATCTGATTACAAT 319624
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || ||||| || || | || || || |||||
Sbjct 319623 ATTCAGAAGGAGTCAACCCTTCACCTTGTGCTTCGCCTCCGTGGTGG 319577
>seq1039
Length=57342
Score = 172 bits (190), Expect = 6e-38
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || |||||| | || ||||| || || || || || || ||| | ||
Sbjct 32210 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAAACAATCACACTGGAAGTGGAGCCCAGT 32151
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
||| || | ||| ||||||| || ||||| ||||||||||| ||||| |||||||||
Sbjct 32150 GATTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCAGACCAG 32091
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || || || ||||| || ||||| | || |||| |||||| | | ||||| ||
Sbjct 32090 CAACGCCTGATCTTTGCGGGAAAGCAGTTGGAAGATGGTCGTACATTGTCTGACTACAAC 32031
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||||||||||||||| |||||||| || | |||||||| ||||||
Sbjct 32030 ATCCAAAAGGAATCCACCCTTCATCTTGTGCTCCGTCTTCGTGGTGGA 31983
Score = 172 bits (190), Expect = 6e-38
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||||||||| || |||||||||||||| |||||||| || || ||||||||| |
Sbjct 49142 ATCATGCAAATCTTCGTGAAGACGCTTACCGGGAAGACTATCACCCTCGAGGTTGAGCCT 49201
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
||||| |||| || ||||||| || ||||| ||||||||||| || || || ||
Sbjct 49202 AGTGATTCGATTGAGAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCGGAT 49261
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
||||||||| | || |||||||| || || | || |||| ||| || || | |||||
Sbjct 49262 CAGCAGCGTTTGATCTTTGCTGGCAAACAGTTGGAAGATGGTCGCACTCTTTCCGACTAC 49321
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||||||| || || ||||| || || | ||||| || |||||
Sbjct 49322 AACATTCAAAAGGAGTCAACACTTCACCTGGTGCTTCGTCTGCGTGGTGG 49371
Score = 168 bits (186), Expect = 8e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| || |||||||| || || || || ||||| ||| | |
Sbjct 31755 AATGCAGATCTTCGTGAAGACTCTAACCGGCAAAACAATCACACTGGAGGTGGAGCCCAG 31696
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|||| || | ||| ||||||| || ||||| || ||||| || ||||| ||||||||
Sbjct 31695 TGATTCGATAGAGAATGTGAAGGCGAAGATTCAAGATAAGGAAGGCATTCCACCAGACCA 31636
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||| || || || ||||| || ||||| | || |||| |||||| | | ||||| ||
Sbjct 31635 GCAACGCCTGATCTTTGCGGGAAAGCAGTTGGAAGATGGTCGTACATTGTCTGACTACAA 31576
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||||||||| |||||||| || | |||||||| || ||
Sbjct 31575 CATCCAAAAGGAATCCACCCTTCATCTTGTGCTTCGTCTTCGTGGAGG 31528
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| || ||||||||||| || || || || ||||| | ||
Sbjct 42870 ATGCAAATCTTTGTCAAGACTCTAACCGGCAAGACCATAACGCTGGAAGTTGAACCCAGT 42811
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
||| |||| ||| | ||||| || || ||||| |||||||| ||||| ||||| ||
Sbjct 42810 GATTCGATTGAGAATGTAAAGGCGAAGATCCAGGATAAGGAGGGCATTCCACCAGATCAA 42751
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||| | || || ||||||||||| | || || | ||| || || | ||||||||
Sbjct 42750 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTCGCACTCTTTCTGACTATAAC 42691
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || ||||| || || | || || || |||||
Sbjct 42690 ATTCAAAAGGAGTCAACGCTTCACCTCGTGCTTCGACTCCGTGGTGG 42644
Score = 158 bits (174), Expect = 1e-33
Identities = 176/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| |||||||| || || ||||||||||| || ||||| ||| | ||
Sbjct 41730 ATGCAGATATTTGTGAAGACGCTAACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 41671
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| || | ||| ||||||| || ||||| ||||||||||| ||||| ||||||||
Sbjct 41670 GACTCAATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCAGACCAA 41611
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || |||||||| ||||| | || |||| |||||| || | || || ||
Sbjct 41610 CAACGATTGATCTTTGCTGGCAAGCAGTTGGAAGATGGTCGTACTCTTTCTGATTACAAC 41551
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTT 27640
|||| |||||||| || ||||| || || | || ||||| || || || |||
Sbjct 41550 ATCCAGAAGGAATCGACCCTTCACCTTGTGCTTCGCCTTCGTGGGGGTTAAATTT 41496
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||| ||||| || |||||||| || || || || ||||| || | |
Sbjct 43098 ATGCAAATTTTTGTGAAGACTCTAACCGGCAAAACAATCACGCTGGAGGTGGAACCCAGC 43039
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| ||||||| || ||||| ||||||||||| ||||| || ||||||
Sbjct 43038 GACACAATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAG 42979
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || || || ||||| || ||||| | || |||| ||| ||||| | ||||| ||
Sbjct 42978 CAACGCCTTATCTTTGCGGGGAAGCAGTTGGAAGATGGTCGGACCCTGTCTGACTACAAC 42919
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || || || ||||| || | || ||||| |||||
Sbjct 42918 ATTCAAAAGGAGTCAACCCTCCATCTTGTGCTTCGACTTCGTGGTGG 42872
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| |||||||| || || ||||||||||| || ||||| ||| | ||
Sbjct 41958 ATGCAGATATTTGTGAAGACGCTAACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 41899
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| || | ||| ||||||| || || || ||||||||||| ||||| |||||||||
Sbjct 41898 GACTCAATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCAGACCAG 41839
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || || || || ||||| || ||||||| ||| ||| | | ||||| ||
Sbjct 41838 CAACGATTGATCTTCGCAGGAAAGCAGCTAGAGGATGGTCGCACCTTGTCCGACTACAAC 41779
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || ||||| | || ||||| | || |||||
Sbjct 41778 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 41732
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| |||||||| || || ||||||||||| || ||||| ||| | ||
Sbjct 42186 ATGCAGATATTTGTGAAGACGCTAACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 42127
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| || | ||| ||||||| || || || ||||||||||| ||||| |||||||||
Sbjct 42126 GACTCAATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCAGACCAG 42067
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || || || || ||||| || ||||||| ||| ||| | | ||||| ||
Sbjct 42066 CAACGATTGATCTTCGCAGGAAAGCAGCTAGAGGATGGTCGCACCTTGTCCGACTACAAC 42007
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || ||||| | || ||||| | || |||||
Sbjct 42006 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 41960
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || || ||||||||||| || ||||| ||| | ||
Sbjct 49373 ATGCAAATATTCGTGAAGACCCTGACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 49432
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| || | ||| ||||||| || ||||| ||||||||||| ||||| ||||||||
Sbjct 49433 GACTCGATAGAGAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGACCAA 49492
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || |||||||| ||||| | || |||| ||| ||||| | ||||| ||
Sbjct 49493 CAACGATTGATCTTTGCTGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTACAAC 49552
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| || ||||| ||| | || | || || || || ||
Sbjct 49553 ATTCAAAAGGAGTCAACTCTGCATTTGGTGCTTCGCCTACGTGGCGG 49599
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || || || ||||||||||| || ||||| ||| | ||
Sbjct 42414 ATGCAAATATTCGTGAAGACCCTGACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 42355
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| || | ||| ||||||| || || || ||||||||||| ||||| |||||||||
Sbjct 42354 GACTCAATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCAGACCAG 42295
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | || || || || ||||| || ||||||| ||| ||| | | ||||| ||
Sbjct 42294 CAACGATTGATCTTCGCAGGAAAGCAGCTAGAGGATGGTCGCACCTTGTCCGACTACAAC 42235
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || ||||| | || ||||| | || |||||
Sbjct 42234 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 42188
Score = 125 bits (138), Expect = 8e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| || || || || |||||||| || || | ||||| ||| || ||
Sbjct 42642 ATGCAGATATTTGTTAAAACCCTCACTGGCAAGACCATCACCTTGGAGGTGGAGCCAAGT 42583
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| || | || ||||||| || || || || |||||||| ||||| |||||||||
Sbjct 42582 GACTCGATAGAGAACGTGAAGGCGAAGATCCAAGATAAGGAGGGCATTCCACCAGACCAG 42523
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || | ||||| || || ||||| || ||||||| ||| ||| | | || || ||
Sbjct 42522 CAACGATTGATTTTCGCAGGAAAGCAGCTGGAGGATGGTCGCACCTTGTCTGATTACAAC 42463
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || ||||| | || ||||| | || |||||
Sbjct 42462 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 42416
>seq7187
Length=4100
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || |||||| | || ||||| || || || || || || ||| | ||
Sbjct 842 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAAACAATCACACTGGAAGTGGAGCCCAGT 783
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
||| || | ||| ||||||| || ||||| ||||||||||| ||||| |||||||||
Sbjct 782 GATTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCAGACCAG 723
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || || || ||||| || ||||| | || |||| |||||| | | ||||| ||
Sbjct 722 CAACGCCTGATCTTTGCGGGAAAGCAGTTGGAAGATGGTCGTACATTGTCTGACTACAAC 663
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||||||||| |||||||| || | |||||||| || ||
Sbjct 662 ATCCAAAAGGAATCCACCCTTCATCTTGTGCTTCGTCTTCGTGGAGG 616
>seq11759
Length=791511
Score = 163 bits (180), Expect = 3e-35
Identities = 377/562 (67%), Gaps = 7/562 (1%)
Strand=Plus/Minus
Query 64309 TACCCTGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAG 64368
|||| |||| | |||||| | ||||||||||| | || |||||||||||| |||||
Sbjct 466635 TACCATGATATTTGGGAGTTCTACAAGAAAGCGGTTGCCTCTTTCTGGACGGTTGAGGAA 466576
Query 64369 GTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTT 64427
|||||||| || |||||||||| |||||||||| ||| || | | | |||| |||||
Sbjct 466575 GTTGATCTAGCGAAGGATCTCACTGACTGGGAAAGCCTTAA-TGATGGCGAACGTCACTT 466517
Query 64428 CATCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGA 64487
||| || ||| | || ||||||||| | ||||| || || || ||| ||| |
Sbjct 466516 CATTTCGTATGTCTTGGCTTTCTTCGCAGCCAGTGATGGCATCGTTAATGAAAATCTAAC 466457
Query 64488 CCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTAT-CAGG 64546
| |||||| || || ||||| || || ||||| || | || |||| | || || |
Sbjct 466456 TTTGAATTTTTGTAACGAGGTTCAAATTCCCGAGGCTCGTTGTTTTTATG-GAATGCAAG 466398
Query 64547 GATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGG 64606
||||| |||||| || | ||| || || |||| || | | || ||
Sbjct 466397 TCGCCGTCGAAAACATTCATTCTGAAATGTACTCTCTTCTGATCGATACCTACGTCAAGG 466338
Query 64607 ATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAA 64666
|||| | || || ||||| | || || | || | || |||| |||| |
Sbjct 466337 ATCCAATGGAACGCGACTTTCTGTTTAACGCCATTCAAACGTTGCCGTGTGTTGCTAAGA 466278
Query 64667 AGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGTCTCG 64723
|||| || ||||| | ||||||| ||| | | | | | ||||||| |
Sbjct 466277 AGGCCGATTGGGCGCTTAGGTGGATTGCAAATAAAAAGGCACCCTACGCCGAGCGTCTGG 466218
Query 64724 CAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGC 64783
|| || || || ||||| | ||||||||||| ||||| ||| ||||||||||
Sbjct 466217 TGGCGTTCGCTGCCGTTGAAGGCGTATTCTTTTCTGGTTCATTTGCTTCCATTTTCTGGC 466158
Query 64784 TAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACG 64843
| || ||||| || || ||||| || || | ||| || ||||||||| ||| ||||
Sbjct 466157 TCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAATGAGCTGATCAGTCGAGACG 466098
Query 64844 AGGGGCTCCACCAAGAATTTGC 64865
| || |||||| || |||||
Sbjct 466097 AAGGCCTCCACACGGATTTTGC 466076
>seq7336
Length=62802
Score = 149 bits (164), Expect = 7e-31
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
||||||||||| ||||| ||||| || || || || || || || |||||||||||| ||
Sbjct 18776 ATAATGCAAATTTTTGTTAAGACTCTCACTGGAAAAACCATAACCCTTGAGGTTGAGCCA 18717
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
||||| ||| | || | || || ||||| || ||||| |||||||| || |||||
Sbjct 18716 AGTGATTCCATCGAGAACGTAAAAGCAAAAATCCAAGACAAAGAGGGAATACCACCAGAT 18657
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|| || || || || || || |||||||| | ||||| | || ||||| | ||||||
Sbjct 18656 CAACAACGGCTTATCTTCGCCGGTAAGCAGTTAGAGGACGGGCGGACCCTCTCCGACTAT 18597
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614
||| | |||||||| || || || ||||| ||
Sbjct 18596 AATATTCAAAAGGAGTCAACACTCCATCTTGT 18565
>seq1473
Length=538379
Score = 127 bits (140), Expect = 2e-24
Identities = 354/536 (66%), Gaps = 19/536 (4%)
Strand=Plus/Minus
Query 81231 CTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGC--CTCC 81288
||||||||| || || | ||| || ||| ||| || || || |||||| ||||
Sbjct 274500 CTTCATGAATAGATCGGGAACCCAAAGTGCGAGGAAGAGATCCCG--AGCGCGAATCTCC 274443
Query 81289 TCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCC 81348
||| | || ||| || ||||| | ||| | || | |||| ||||||||| ||
Sbjct 274442 TCAGCGCCAGTGTTCTTCCGTAACTCCACAAACTGCAGTACATCCGGATGCCATGGTTCG 274383
Query 81349 AGATACACGGCGATCGACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCA 81402
||||| | ||| | | || | | || ||| ||||| | ||| ||||| ||
Sbjct 274382 AGATAGATGGCAAAGGCACC---GGGTCGTTTGTTGCCTCCCTGATCGACATAACGAGCG 274326
Query 81403 GTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACG 81462
|| ||| || || || | ||| || | | ||| | |||| || || || || ||
Sbjct 274325 GTGCTGTTGAAGACCCGAAGCATCGGTACAAGACCGTTGGACTCCCCATTGGTTCCAGCG 274266
Query 81463 ATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACT 81520
||| || |||| || | | || ||||| ||||||| ||||| | |
Sbjct 274265 ATAAACGTATTCTTGCTTCGGATGCAGTGAACATTGA--GACCGATCCCACCCGCGTTTT 274208
Query 81521 TTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCA 81580
| || ||| | ||||| | || | || ||||| || |||||||| || || | |||||
Sbjct 274207 TCGAGATCAGTGCACATTGTTTGAGCGTGTCATATATACCCTCGATACTGTCGTCTTTCA 274148
Query 81581 TGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTG 81640
| |||||| |||||||| |||||||||||| | || ||||| || || || |
Sbjct 274147 TTGTAAGCAAAAAACAGCTGGACATCTGAGGGTAAGGCGTCCCAGCATTAAAAAGAGTGG 274088
Query 81641 GGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGA 81699
| | |||||||| || | | ||||| || | |||||| || | | ||||
Sbjct 274087 GTGAGGCGTGAATCAACCACTTTTCAGACATTAGATTATAGGTCTCAATAGCAGCGT-CC 274029
Query 81700 ATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755
| ||| ||||| |||||||| || | || ||||||||||||||||| ||| ||||
Sbjct 274028 ACATCTTCACCATGAATACCTATCGAGACGCGCATAAACATGTACTGAGGCCTCTC 273973
>seq5605
Length=468275
Score = 111 bits (122), Expect = 2e-19
Identities = 238/356 (67%), Gaps = 0/356 (0%)
Strand=Plus/Minus
Query 32047 GACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGC 32106
|| || |||||||| ||| | | || |||||||||| | |||| ||||| |||
Sbjct 236214 GAGATTAAGGTGGCTCAGTTATGCGGTGCCGTGGCAGAGATGTCCTCCTACCACCATGGC 236155
Query 32107 GAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAAC 32166
|||| ||| ||| |||||| || | || |||||| ||||||| ||| | || |||
Sbjct 236154 GAGGTGTCCCTCATGGGCACTATCATTGGGCTGGCTCAGGACTTTGTAGGTTCCAACAAC 236095
Query 32167 CTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCT 32226
|| || | | ||| | ||| ||||| || || || |||||||||||||||||| ||
Sbjct 236094 CTCAATCTGTTGATGCCTTATGGTCAGTTCGGTACGCGTCTCGCCGGTGGCAAGGATTCT 236035
Query 32227 GCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCG 32286
|| ||||||| || || ||| || ||| || |||||||| || || |
Sbjct 236034 GCTTCTGCCCGTTATATTTTTACCGCCCTTAGTCCTCTAACCCGCAAGATCTTTCACGAG 235975
Query 32287 TCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTC 32346
||||| || | | || ||| ||||| ||| ||| | ||||||| | |
Sbjct 235974 AACGACGACGCTATTTTAAACTACCTATTTGAGGACAATCAAAAGATCGAGCCTGCATGG 235915
Query 32347 TACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
|||| ||| || | || ||| || | | || || || || || || || |||||
Sbjct 235914 TACATTCCAGTCATCCCCATGGTCCTCATCAATGGAGCTGAGGGTATTGGTACGGG 235859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570216790676720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |