Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07] 13,131 sequences; 129,810,970 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq7000 185 1e-41 seq1039 172 6e-38 seq7187 167 3e-36 seq11759 163 3e-35 seq7336 149 7e-31 seq1473 127 2e-24 seq5605 111 2e-19 >seq7000 Length=1252665 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || ||||||||||| ||||| ||||||||||| || | Sbjct 319803 ATGCAGATTTTTGTGAAAACTCTTACCGGCAAAACTATCACTCTTGAGGTCGAACCTTCC 319744 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| |||| ||| |||||||||| ||||||||||||||||| ||||| |||||||| Sbjct 319743 GATTCTATTGAGAATGTGAAGGCTAAGATTCAGGACAAGGAGGGGATTCCGCCAGACCAA 319684 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||||||||| |||||| | ||||||| ||| || || | || || ||| Sbjct 319683 CAGCGTCTTATTTTTGCTGGCAAGCAATTGGAGGATGGACGTTCCTTATCTGATTACAAT 319624 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| || || | || || || ||||| Sbjct 319623 ATTCAGAAGGAGTCAACCCTTCACCTTGTGCTTCGCCTCCGTGGTGG 319577 >seq1039 Length=57342 Score = 172 bits (190), Expect = 6e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||| | || ||||| || || || || || || ||| | || Sbjct 32210 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAAACAATCACACTGGAAGTGGAGCCCAGT 32151 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| || | ||| ||||||| || ||||| ||||||||||| ||||| ||||||||| Sbjct 32150 GATTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCAGACCAG 32091 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || ||||| || ||||| | || |||| |||||| | | ||||| || Sbjct 32090 CAACGCCTGATCTTTGCGGGAAAGCAGTTGGAAGATGGTCGTACATTGTCTGACTACAAC 32031 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||||||||||||||| |||||||| || | |||||||| |||||| Sbjct 32030 ATCCAAAAGGAATCCACCCTTCATCTTGTGCTCCGTCTTCGTGGTGGA 31983 Score = 172 bits (190), Expect = 6e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||||||||| || |||||||||||||| |||||||| || || ||||||||| | Sbjct 49142 ATCATGCAAATCTTCGTGAAGACGCTTACCGGGAAGACTATCACCCTCGAGGTTGAGCCT 49201 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| |||| || ||||||| || ||||| ||||||||||| || || || || Sbjct 49202 AGTGATTCGATTGAGAACGTGAAGGCCAAGATTCAAGACAAGGAGGGTATCCCACCGGAT 49261 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||| | || |||||||| || || | || |||| ||| || || | ||||| Sbjct 49262 CAGCAGCGTTTGATCTTTGCTGGCAAACAGTTGGAAGATGGTCGCACTCTTTCCGACTAC 49321 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | |||||||| || || ||||| || || | ||||| || ||||| Sbjct 49322 AACATTCAAAAGGAGTCAACACTTCACCTGGTGCTTCGTCTGCGTGGTGG 49371 Score = 168 bits (186), Expect = 8e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || |||||||| || || || || ||||| ||| | | Sbjct 31755 AATGCAGATCTTCGTGAAGACTCTAACCGGCAAAACAATCACACTGGAGGTGGAGCCCAG 31696 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| || | ||| ||||||| || ||||| || ||||| || ||||| |||||||| Sbjct 31695 TGATTCGATAGAGAATGTGAAGGCGAAGATTCAAGATAAGGAAGGCATTCCACCAGACCA 31636 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| || || || ||||| || ||||| | || |||| |||||| | | ||||| || Sbjct 31635 GCAACGCCTGATCTTTGCGGGAAAGCAGTTGGAAGATGGTCGTACATTGTCTGACTACAA 31576 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||||||||| |||||||| || | |||||||| || || Sbjct 31575 CATCCAAAAGGAATCCACCCTTCATCTTGTGCTTCGTCTTCGTGGAGG 31528 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || ||||||||||| || || || || ||||| | || Sbjct 42870 ATGCAAATCTTTGTCAAGACTCTAACCGGCAAGACCATAACGCTGGAAGTTGAACCCAGT 42811 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| |||| ||| | ||||| || || ||||| |||||||| ||||| ||||| || Sbjct 42810 GATTCGATTGAGAATGTAAAGGCGAAGATCCAGGATAAGGAGGGCATTCCACCAGATCAA 42751 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||||||||| | || || | ||| || || | |||||||| Sbjct 42750 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGACGGTCGCACTCTTTCTGACTATAAC 42691 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| || || ||||| || || | || || || ||||| Sbjct 42690 ATTCAAAAGGAGTCAACGCTTCACCTCGTGCTTCGACTCCGTGGTGG 42644 Score = 158 bits (174), Expect = 1e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| |||||||| || || ||||||||||| || ||||| ||| | || Sbjct 41730 ATGCAGATATTTGTGAAGACGCTAACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 41671 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | ||| ||||||| || ||||| ||||||||||| ||||| |||||||| Sbjct 41670 GACTCAATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCAGACCAA 41611 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || |||||||| ||||| | || |||| |||||| || | || || || Sbjct 41610 CAACGATTGATCTTTGCTGGCAAGCAGTTGGAAGATGGTCGTACTCTTTCTGATTACAAC 41551 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTT 27640 |||| |||||||| || ||||| || || | || ||||| || || || ||| Sbjct 41550 ATCCAGAAGGAATCGACCCTTCACCTTGTGCTTCGCCTTCGTGGGGGTTAAATTT 41496 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || |||||||| || || || || ||||| || | | Sbjct 43098 ATGCAAATTTTTGTGAAGACTCTAACCGGCAAAACAATCACGCTGGAGGTGGAACCCAGC 43039 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| ||||||| || ||||| ||||||||||| ||||| || |||||| Sbjct 43038 GACACAATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAG 42979 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || ||||| || ||||| | || |||| ||| ||||| | ||||| || Sbjct 42978 CAACGCCTTATCTTTGCGGGGAAGCAGTTGGAAGATGGTCGGACCCTGTCTGACTACAAC 42919 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| || || || ||||| || | || ||||| ||||| Sbjct 42918 ATTCAAAAGGAGTCAACCCTCCATCTTGTGCTTCGACTTCGTGGTGG 42872 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| |||||||| || || ||||||||||| || ||||| ||| | || Sbjct 41958 ATGCAGATATTTGTGAAGACGCTAACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 41899 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | ||| ||||||| || || || ||||||||||| ||||| ||||||||| Sbjct 41898 GACTCAATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCAGACCAG 41839 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || || || ||||| || ||||||| ||| ||| | | ||||| || Sbjct 41838 CAACGATTGATCTTCGCAGGAAAGCAGCTAGAGGATGGTCGCACCTTGTCCGACTACAAC 41779 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| | || ||||| | || ||||| Sbjct 41778 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 41732 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| |||||||| || || ||||||||||| || ||||| ||| | || Sbjct 42186 ATGCAGATATTTGTGAAGACGCTAACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 42127 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | ||| ||||||| || || || ||||||||||| ||||| ||||||||| Sbjct 42126 GACTCAATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCAGACCAG 42067 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || || || ||||| || ||||||| ||| ||| | | ||||| || Sbjct 42066 CAACGATTGATCTTCGCAGGAAAGCAGCTAGAGGATGGTCGCACCTTGTCCGACTACAAC 42007 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| | || ||||| | || ||||| Sbjct 42006 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 41960 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || || ||||||||||| || ||||| ||| | || Sbjct 49373 ATGCAAATATTCGTGAAGACCCTGACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 49432 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | ||| ||||||| || ||||| ||||||||||| ||||| |||||||| Sbjct 49433 GACTCGATAGAGAATGTGAAGGCAAAGATTCAAGACAAGGAGGGCATTCCACCAGACCAA 49492 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || |||||||| ||||| | || |||| ||| ||||| | ||||| || Sbjct 49493 CAACGATTGATCTTTGCTGGCAAGCAGTTGGAAGATGGTCGCACCCTGTCCGACTACAAC 49552 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| || ||||| ||| | || | || || || || || Sbjct 49553 ATTCAAAAGGAGTCAACTCTGCATTTGGTGCTTCGCCTACGTGGCGG 49599 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || || || ||||||||||| || ||||| ||| | || Sbjct 42414 ATGCAAATATTCGTGAAGACCCTGACTGGGAAGACTATTACGCTGGAGGTGGAGCCGAGT 42355 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | ||| ||||||| || || || ||||||||||| ||||| ||||||||| Sbjct 42354 GACTCAATAGAGAATGTGAAGGCGAAGATCCAAGACAAGGAGGGCATTCCACCAGACCAG 42295 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | || || || || ||||| || ||||||| ||| ||| | | ||||| || Sbjct 42294 CAACGATTGATCTTCGCAGGAAAGCAGCTAGAGGATGGTCGCACCTTGTCCGACTACAAC 42235 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| | || ||||| | || ||||| Sbjct 42234 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 42188 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || || || |||||||| || || | ||||| ||| || || Sbjct 42642 ATGCAGATATTTGTTAAAACCCTCACTGGCAAGACCATCACCTTGGAGGTGGAGCCAAGT 42583 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||||| || || || || |||||||| ||||| ||||||||| Sbjct 42582 GACTCGATAGAGAACGTGAAGGCGAAGATCCAAGATAAGGAGGGCATTCCACCAGACCAG 42523 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | ||||| || || ||||| || ||||||| ||| ||| | | || || || Sbjct 42522 CAACGATTGATTTTCGCAGGAAAGCAGCTGGAGGATGGTCGCACCTTGTCTGATTACAAC 42463 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| | || ||||| | || ||||| Sbjct 42462 ATTCAGAAGGAGTCGACGCTTCACTTGGTGCTGCGTTTGCGTGGTGG 42416 >seq7187 Length=4100 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||| | || ||||| || || || || || || ||| | || Sbjct 842 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAAACAATCACACTGGAAGTGGAGCCCAGT 783 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||| || | ||| ||||||| || ||||| ||||||||||| ||||| ||||||||| Sbjct 782 GATTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCAGACCAG 723 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || ||||| || ||||| | || |||| |||||| | | ||||| || Sbjct 722 CAACGCCTGATCTTTGCGGGAAAGCAGTTGGAAGATGGTCGTACATTGTCTGACTACAAC 663 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||||||||| |||||||| || | |||||||| || || Sbjct 662 ATCCAAAAGGAATCCACCCTTCATCTTGTGCTTCGTCTTCGTGGAGG 616 >seq11759 Length=791511 Score = 163 bits (180), Expect = 3e-35 Identities = 377/562 (67%), Gaps = 7/562 (1%) Strand=Plus/Minus Query 64309 TACCCTGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAG 64368 |||| |||| | |||||| | ||||||||||| | || |||||||||||| ||||| Sbjct 466635 TACCATGATATTTGGGAGTTCTACAAGAAAGCGGTTGCCTCTTTCTGGACGGTTGAGGAA 466576 Query 64369 GTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTT 64427 |||||||| || |||||||||| |||||||||| ||| || | | | |||| ||||| Sbjct 466575 GTTGATCTAGCGAAGGATCTCACTGACTGGGAAAGCCTTAA-TGATGGCGAACGTCACTT 466517 Query 64428 CATCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGA 64487 ||| || ||| | || ||||||||| | ||||| || || || ||| ||| | Sbjct 466516 CATTTCGTATGTCTTGGCTTTCTTCGCAGCCAGTGATGGCATCGTTAATGAAAATCTAAC 466457 Query 64488 CCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTAT-CAGG 64546 | |||||| || || ||||| || || ||||| || | || |||| | || || | Sbjct 466456 TTTGAATTTTTGTAACGAGGTTCAAATTCCCGAGGCTCGTTGTTTTTATG-GAATGCAAG 466398 Query 64547 GATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGG 64606 ||||| |||||| || | ||| || || |||| || | | || || Sbjct 466397 TCGCCGTCGAAAACATTCATTCTGAAATGTACTCTCTTCTGATCGATACCTACGTCAAGG 466338 Query 64607 ATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAA 64666 |||| | || || ||||| | || || | || | || |||| |||| | Sbjct 466337 ATCCAATGGAACGCGACTTTCTGTTTAACGCCATTCAAACGTTGCCGTGTGTTGCTAAGA 466278 Query 64667 AGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGTCTCG 64723 |||| || ||||| | ||||||| ||| | | | | | ||||||| | Sbjct 466277 AGGCCGATTGGGCGCTTAGGTGGATTGCAAATAAAAAGGCACCCTACGCCGAGCGTCTGG 466218 Query 64724 CAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGC 64783 || || || || ||||| | ||||||||||| ||||| ||| |||||||||| Sbjct 466217 TGGCGTTCGCTGCCGTTGAAGGCGTATTCTTTTCTGGTTCATTTGCTTCCATTTTCTGGC 466158 Query 64784 TAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACG 64843 | || ||||| || || ||||| || || | ||| || ||||||||| ||| |||| Sbjct 466157 TCAAGAAGCGTGGTCTCATGCCTGGCCTCACCTTTAGTAATGAGCTGATCAGTCGAGACG 466098 Query 64844 AGGGGCTCCACCAAGAATTTGC 64865 | || |||||| || ||||| Sbjct 466097 AAGGCCTCCACACGGATTTTGC 466076 >seq7336 Length=62802 Score = 149 bits (164), Expect = 7e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 ||||||||||| ||||| ||||| || || || || || || || |||||||||||| || Sbjct 18776 ATAATGCAAATTTTTGTTAAGACTCTCACTGGAAAAACCATAACCCTTGAGGTTGAGCCA 18717 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| ||| | || | || || ||||| || ||||| |||||||| || ||||| Sbjct 18716 AGTGATTCCATCGAGAACGTAAAAGCAAAAATCCAAGACAAAGAGGGAATACCACCAGAT 18657 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || || || || || || |||||||| | ||||| | || ||||| | |||||| Sbjct 18656 CAACAACGGCTTATCTTCGCCGGTAAGCAGTTAGAGGACGGGCGGACCCTCTCCGACTAT 18597 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 ||| | |||||||| || || || ||||| || Sbjct 18596 AATATTCAAAAGGAGTCAACACTCCATCTTGT 18565 >seq1473 Length=538379 Score = 127 bits (140), Expect = 2e-24 Identities = 354/536 (66%), Gaps = 19/536 (4%) Strand=Plus/Minus Query 81231 CTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGC--CTCC 81288 ||||||||| || || | ||| || ||| ||| || || || |||||| |||| Sbjct 274500 CTTCATGAATAGATCGGGAACCCAAAGTGCGAGGAAGAGATCCCG--AGCGCGAATCTCC 274443 Query 81289 TCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCC 81348 ||| | || ||| || ||||| | ||| | || | |||| ||||||||| || Sbjct 274442 TCAGCGCCAGTGTTCTTCCGTAACTCCACAAACTGCAGTACATCCGGATGCCATGGTTCG 274383 Query 81349 AGATACACGGCGATCGACCCCTTGCGACG------GCCACCCTGGTTGACGTAACGGGCA 81402 ||||| | ||| | | || | | || ||| ||||| | ||| ||||| || Sbjct 274382 AGATAGATGGCAAAGGCACC---GGGTCGTTTGTTGCCTCCCTGATCGACATAACGAGCG 274326 Query 81403 GTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACG 81462 || ||| || || || | ||| || | | ||| | |||| || || || || || Sbjct 274325 GTGCTGTTGAAGACCCGAAGCATCGGTACAAGACCGTTGGACTCCCCATTGGTTCCAGCG 274266 Query 81463 ATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACT 81520 ||| || |||| || | | || ||||| ||||||| ||||| | | Sbjct 274265 ATAAACGTATTCTTGCTTCGGATGCAGTGAACATTGA--GACCGATCCCACCCGCGTTTT 274208 Query 81521 TTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCA 81580 | || ||| | ||||| | || | || ||||| || |||||||| || || | ||||| Sbjct 274207 TCGAGATCAGTGCACATTGTTTGAGCGTGTCATATATACCCTCGATACTGTCGTCTTTCA 274148 Query 81581 TGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTG 81640 | |||||| |||||||| |||||||||||| | || ||||| || || || | Sbjct 274147 TTGTAAGCAAAAAACAGCTGGACATCTGAGGGTAAGGCGTCCCAGCATTAAAAAGAGTGG 274088 Query 81641 GGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGA 81699 | | |||||||| || | | ||||| || | |||||| || | | |||| Sbjct 274087 GTGAGGCGTGAATCAACCACTTTTCAGACATTAGATTATAGGTCTCAATAGCAGCGT-CC 274029 Query 81700 ATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 | ||| ||||| |||||||| || | || ||||||||||||||||| ||| |||| Sbjct 274028 ACATCTTCACCATGAATACCTATCGAGACGCGCATAAACATGTACTGAGGCCTCTC 273973 >seq5605 Length=468275 Score = 111 bits (122), Expect = 2e-19 Identities = 238/356 (67%), Gaps = 0/356 (0%) Strand=Plus/Minus Query 32047 GACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGC 32106 || || |||||||| ||| | | || |||||||||| | |||| ||||| ||| Sbjct 236214 GAGATTAAGGTGGCTCAGTTATGCGGTGCCGTGGCAGAGATGTCCTCCTACCACCATGGC 236155 Query 32107 GAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAAC 32166 |||| ||| ||| |||||| || | || |||||| ||||||| ||| | || ||| Sbjct 236154 GAGGTGTCCCTCATGGGCACTATCATTGGGCTGGCTCAGGACTTTGTAGGTTCCAACAAC 236095 Query 32167 CTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCT 32226 || || | | ||| | ||| ||||| || || || |||||||||||||||||| || Sbjct 236094 CTCAATCTGTTGATGCCTTATGGTCAGTTCGGTACGCGTCTCGCCGGTGGCAAGGATTCT 236035 Query 32227 GCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGACCCG 32286 || ||||||| || || ||| || ||| || |||||||| || || | Sbjct 236034 GCTTCTGCCCGTTATATTTTTACCGCCCTTAGTCCTCTAACCCGCAAGATCTTTCACGAG 235975 Query 32287 TCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTC 32346 ||||| || | | || ||| ||||| ||| ||| | ||||||| | | Sbjct 235974 AACGACGACGCTATTTTAAACTACCTATTTGAGGACAATCAAAAGATCGAGCCTGCATGG 235915 Query 32347 TACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 |||| ||| || | || ||| || | | || || || || || || || ||||| Sbjct 235914 TACATTCCAGTCATCCCCATGGTCCTCATCAATGGAGCTGAGGGTATTGGTACGGG 235859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570216790676720