Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Taenia_20solium_20[genbank_20GCA_5F001870725.1_202016-11-07]
13,131 sequences; 129,810,970 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 179 4e-40
>seq11759
Length=791511
Score = 179 bits (198), Expect = 4e-40
Identities = 406/603 (67%), Gaps = 8/603 (1%)
Strand=Plus/Plus
Query 23497 TTAAACAATAAA-CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATT 23555
||||| ||||| ||||||||||| || |||||||| || | ||| |||| |||||
Sbjct 466061 TTAAA-AATAAGGCATGCAAAATCCGTGTGGAGGCCTTCGTCTCGACTGATCAGCTCATT 466119
Query 23556 AGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGA 23615
| ||| || | || ||||| | || || || || | ||| || || | |||||||||
Sbjct 466120 ACTAAAGGTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAATGA 466179
Query 23616 TCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC 23675
|| |||||||| | || ||||| || || || ||||| ||||| | | | |||
Sbjct 466180 ACCAGAAAAGAATACGCCTTCAACGGCAGCGAACGCCACCAGACGCTCGGCGTAGGGTGC 466239
Query 23676 ATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGT 23735
|| | || | |||||| | | ||||| |||||| |||||| | ||
Sbjct 466240 CTTTTTATTTGCAATCCACCTAAGCGCCCAATCGGCCTTCTTAGCAACACACGGCAACGT 466299
Query 23736 TTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT--ATCTGTTATATATGTATCAATT 23793
|| ||| || || || ||||| ||| |||| ||| | | || ||||| ||
Sbjct 466300 TTGAATGGCGTTAAACAGAAAGTCGCGTTC--CATTGGATCCTTGACGTAGGTATCGATC 466357
Query 23794 AGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACAT 23853
|| | | ||||||||||||||||| ||||| | || | || | |||||||||||
Sbjct 466358 AGAAGAGAGTACATTTCAGAATGAATGTTTTCGACGGCGACTTGCATTCCATAAAAACAA 466417
Query 23854 CTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATA 23913
| ||| || | | |||||| || ||| |||| | || || |||||| ||||| ||
Sbjct 466418 CGAGCCTCGGGAATTTGAACCTCGTTACAAAAATTCAAAGTTAGATTTTCATTAACGATG 466477
Query 23914 CCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGAT 23973
|||||||| || || |||||||| | ||||| || || || | ||| || | |
Sbjct 466478 CCATCACTGGCTGCGAAGAAAGCCAAGACATACGAAATGAAGTGACGTTCGCCA-TCATT 466536
Query 23974 AA-TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACT 24032
|| ||| ||| ||| | | ||| || | || ||||||||| ||||| ||||| |||
Sbjct 466537 AAGGCTTTCCCAGTCAGTGAGATCCTTCGCTAGATCAACTTCCTCAACCGTCCAGAAAGA 466596
Query 24033 TGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092
|| | || ||| || | ||||||||||| | ||| || || | | |||||
Sbjct 466597 GGCAACCGCTTTCTTGTAGAACTCCCAAATATCATGGTATTGGATGGGCATCACAACGAA 466656
Query 24093 TCT 24095
|||
Sbjct 466657 TCT 466659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521402404263400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |