Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq27942 93.3 4e-14 >seq27942 Length=6783 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||| || || ||||| || ||||| || || |||| ||| ||| | | || Sbjct 3796 AGAACAAGATGTAATGTCGACTCTTTCTGAATATTGTAATCCGACAGTGTTCGTCCATCT 3737 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || |||||||| || || ||||||| | ||| || || || | |||||||||||| Sbjct 3736 TCAAGCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCT 3677 Query 21084 GCGATCTTTTGTTTCACCTGGC-CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 ||||| |||| ||| | | | || ||| | || || ||| | ||| ||||| Sbjct 3676 TGAATCTTAGCCTTCA-CTGCCTCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGT 3618 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCTC 21185 || || |||| ||||| ||||| || ||||| || |||||| Sbjct 3617 TTTCCCCGTTAGTGTTTTCACAAAAATCTGCATCTTCAATCTC 3575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421289799629204