Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq27942 111 1e-19 >seq27942 Length=6783 Score = 111 bits (122), Expect = 1e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| || | ||| |||||||| ||||| |||||||| || || || ||| || | Sbjct 3792 CAAGATGTAATGTCGACTCTTTCTGAATATTGTAATCCGACAGTGTTCGTCCATCTTCAA 3733 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 ||||||| || ||| | || |||||||| ||||| || |||||||| ||||||||| || Sbjct 3732 GCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCTTGAA 3673 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || || | |||||| | || || || | ||| | ||||| | Sbjct 3672 TCTTAGCCTTCACTGCCTCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGTTTTCC 3613 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || ||||| |||||||||||||| Sbjct 3612 CCGTTAGTGTTTTCACAAAAATCTGCAT 3585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432834435079348