Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq27942 93.3 3e-14 >seq27942 Length=6783 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||| || || | ||||||||| |||| ||| ||| | || || | ||||| ||||| || Sbjct 3776 CTCTTTCTGAATATTGTAATCCGACAGTGTTCGTCCATCTTCAAGCTGTTTACCGGCGAA 3717 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 ||| | ||||||||||| | || | ||||| || || ||| | || ||| Sbjct 3716 AATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCTTGAATCTTAGCCTTCACTGC 3657 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | ||||| ||| || || || | ||||| ||||| || ||||| |||||||| Sbjct 3656 CTCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGTTTTCCCCGTTAGTGTTTTCAC 3597 Query 43098 AAAAATTTGCATTTTC 43113 |||||| ||||| ||| Sbjct 3596 AAAAATCTGCATCTTC 3581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380494071813402