Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09-
24] 188,369 sequences; 701,762,036 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq27942 87.8 1e-12
>seq27942
Length=6783
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/214 (71%), Gaps = 14/214 (7%)
Strand=Plus/Minus
Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC-ATC--CAA 33222
||| |||||||||||||| || ||||||||||| |||| | ||| ||| ||| |||
Sbjct 3788 ATGTAATGTCGACTCTTTCTGAATATTGTAATCCGACA----GTGTTCGTCCATCTTCAA 3733
Query 33223 T-TGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAA 33281
|| || || || || | ||| || || || | ||||||||||| || || ||
Sbjct 3732 GCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCTTGAA 3673
Query 33282 TC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTT 33338
|| ||| || |||| | || ||||| |||| ||| || || ||||| ||||
Sbjct 3672 TCTTAGCC---TTCACTGCCTCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGTTT 3616
Query 33339 TTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
| ||||| || ||||| || ||||| ||||| ||
Sbjct 3615 TCCCCGTTAGTGTTTTCACAAAAATCTGCATCTT 3582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318045767221362
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |