Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq27942 87.8 1e-12 >seq27942 Length=6783 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/214 (71%), Gaps = 14/214 (7%) Strand=Plus/Minus Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC-ATC--CAA 33222 ||| |||||||||||||| || ||||||||||| |||| | ||| ||| ||| ||| Sbjct 3788 ATGTAATGTCGACTCTTTCTGAATATTGTAATCCGACA----GTGTTCGTCCATCTTCAA 3733 Query 33223 T-TGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAA 33281 || || || || || | ||| || || || | ||||||||||| || || || Sbjct 3732 GCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCTTGAA 3673 Query 33282 TC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTT 33338 || ||| || |||| | || ||||| |||| ||| || || ||||| |||| Sbjct 3672 TCTTAGCC---TTCACTGCCTCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGTTT 3616 Query 33339 TTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 | ||||| || ||||| || ||||| ||||| || Sbjct 3615 TCCCCGTTAGTGTTTTCACAAAAATCTGCATCTT 3582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318045767221362