Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq61783 84.2 1e-11 seq28637 84.2 1e-11 >seq61783 Length=3072 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||| | | Sbjct 434 GGATCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTACGGAG 375 Query 11528 CCG 11530 ||| Sbjct 374 CCG 372 >seq28637 Length=6646 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 11470 ATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||| |||||||||||||||||||||||| ||| ||||||||| | ||| Sbjct 6646 ATCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCGACTGAGCTACGGAGCC 6587 Query 11530 GTCGA 11534 | ||| Sbjct 6586 GGCGA 6582 Lambda K H 0.641 0.410 0.924 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260890882313044