Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq28879 102 2e-16 >seq28879 Length=6601 Score = 102 bits (112), Expect = 2e-16 Identities = 208/309 (67%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 363772 GTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAG 363831 ||||| ||| | || || ||| |||||||||| | || || || || || || || Sbjct 3584 GTTCCGATGTTGCGCGTATTTAACAATACTGCACGCTATGTTGATCAAGGAGGCAACAAA 3643 Query 363832 CGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTT 363891 || ||| || |||||||||||| | || ||| ||| ||||| | ||| ||||| | Sbjct 3644 CGTCCAGGCGCATTTGCTATGTATTTGGAACCTTGGCATCCCGATGTATTTCAGTTTGTA 3703 Query 363892 GAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTT 363951 || | || ||||| || || || ||| | || || || ||| |||||| ||| || Sbjct 3704 GAAATGCGCAAAAATACAGGCGCTGAAGAAGTTCGAGCTCGAGATTTGTTCTTTGCTCTA 3763 Query 363952 TGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGC 364011 ||| | ||||| ||| ||| || || || || | || ||| || | | Sbjct 3764 TGGATACCTGACATTTTCATGCGTCGTGTTGAAGCTAACGATAAATGGACATTGATGGAT 3823 Query 364012 CCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAA 364071 || || |||||||||||| | | || |||||||||| || | | ||||| || ||| Sbjct 3824 CCTCATGAATGTCCAGGTTTGCCAGAACTATGGGGTGAAGAGTTCGAAGCTCTTTATGAA 3883 Query 364072 AAGTATGAA 364080 | |||||| Sbjct 3884 CAATATGAA 3892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300207985004558