Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq27942 105 6e-18 >seq27942 Length=6783 Score = 105 bits (116), Expect = 6e-18 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||| |||||| |||| || ||| | || ||| | ||||| || | Sbjct 3582 AAGATGCAGATTTTTGTGAAAACACTAACGGGGAAAACCATAACCCTTGAAGTTGAACCT 3641 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||| ||| ||| || |||||| ||||| ||||||||||| || ||| Sbjct 3642 GCTGACACCATAGAGGCAGTGAAGGCTAAGATTCAAGACAAGGAAGGCATACCACCAGAT 3701 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATT 24165 |||||| | || |||| || ||| || || || |||||| ||| | || ||| |||| Sbjct 3702 CAACAGCGTCTTATTTTCGCCGGTAAACAGCTTGAAGATGGACGAACACTGTC--GGATT 3759 Query 24166 ATAACATTCAAAAAGAATCTACAATTCAT 24194 | || ||||| ||||| || ||| | ||| Sbjct 3760 ACAATATTCAGAAAGAGTCGACATTACAT 3788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428948975637195