Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq27942 123 2e-23 >seq27942 Length=6783 Score = 123 bits (136), Expect = 2e-23 Identities = 159/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || ||| |||| || | ||||| || | || Sbjct 3585 ATGCAGATTTTTGTGAAAACACTAACGGGGAAAACCATAACCCTTGAAGTTGAACCTGCT 3644 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| || ||||| | || | ||| ||||| ||||| || ||||| || || Sbjct 3645 GACACCATAGAGGCAGTGAAGGCTAAGATTCAA-GACAAGGAAGGCATACCACCAGATCA 3703 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATTAC 25175 |||||| ||||||| ||||| ||||| | ||||||| || |||||| || ||||| Sbjct 3704 ACAGCGTCTTATTTTCGCCGGTAAACAGCTTGAAGATGGACGAACACTGTCGG--ATTAC 3761 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| || || ||||| | || || Sbjct 3762 AATATTCAGAAAGAGTCGACATTACATCTTGTTCT 3796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432333188462735