Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq27942 138 9e-28 >seq27942 Length=6783 Score = 138 bits (152), Expect = 9e-28 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| ||||| |||| || ||||| | || |||||||| ||| | Sbjct 3582 AAGATGCAGATTTTTGTGAAAACACTAACGGGGAAAACCATAACCCTTGAAGTTGAACCT 3641 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | || | | || || |||||||||||||| || || ||||| ||| Sbjct 3642 GCTGACACCATAGAGGCAGTGAAGGCTAAGATTCAAGACAAGGAAGGCATACCACCAGAT 3701 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| |||||||| || ||||| |||||| | || ||| || || | || |||||| Sbjct 3702 CAACAGCGTCTTATTTTCGCCGGTAAACAGCTTGAAGATGGACGAACACTGTCGGATTAC 3761 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || ||||| ||||| || || ||||| | ||| | || | || || ||| || Sbjct 3762 AATATTCAGAAAGAGTCGACATTACATCTTGTTCTTCGTCTTCGTGGTGGTATT 3815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418764410624485