Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq27942 84.2 2e-11 >seq27942 Length=6783 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/236 (68%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 || ||||| || ||| | |||||| ||||||| |||||||| ||| | ||| ||| | Sbjct 3582 AAGATGCAGATTTTTGTGAAAACACTAACGGGGAAAACCATAACCCTTGAAGTTGAACCT 3641 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 || || || | | | | ||| || ||| || || || || |||| | | Sbjct 3642 GCTGACACCATAGAGGCAGTGAAGGCTAAGATTCAAGACAAGGAAGGCATACCACCAGAT 3701 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 |||||| | ||||| || || || ||||| || |||||| | ||| || | |||||| Sbjct 3702 CAACAGCGTCTTATTTTCGCCGGTAAACAGCTTGAAGATGGACGAACACTGTCGGATTAC 3761 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTA 22066 ||||||||||| || || || | ||| | || | ||| | || || || ||||| Sbjct 3762 AATATTCAGAAAGAGTCGACATTACATCTTGTTCTTCGTCTTCGTGGTGG-TATTA 3816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357302635997626