Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq27942 89.7 5e-13 >seq27942 Length=6783 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||||| | ||||| || ||||| ||||| || | Sbjct 3811 CCACCACGAAGACGAAGAACAAGATGTAATGTCGACTCTTTCTGAATATTGTAATCCGAC 3752 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || || |||||||||| | || ||||||||||| || || ||| Sbjct 3751 AGTGTTCGTCCATCTTCAAGCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGGT 3692 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG-TTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| | || | || | || || | |||||| | | || || Sbjct 3691 ATGCCTTCCTTGTC-TTGAATCTTAGCCTTCACTGCCTCTATGGTGTCAGCAGGTTCAAC 3633 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || || ||||| |||||||||||||| Sbjct 3632 TTCAAGGGTTATGGTTTTCCCCGTTAGTGTTTTCACAAAAATCTGCAT 3585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495093894349680