Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq7169 93.3 7e-14 >seq7169 Length=15740 Score = 93.3 bits (102), Expect = 7e-14 Identities = 193/283 (68%), Gaps = 7/283 (2%) Strand=Plus/Plus Query 159791 CAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCG 159850 || || || || | ||| ||||| || || |||||||||| ||||| || || ||| || Sbjct 6255 CAATTCATTCCTATCAGGCTAACAGGTAGAGCTTCCGACAAAAACTGCTGTTCTATCACG 6314 Query 159851 ACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCC 159910 || ||||| ||| |||| | | || || | ||||| || ||||| | Sbjct 6315 ACAGCTTCTTTCATAATCAACTCAATGCGCTCTTTAGGAGGCTTCTTCACTATGTGTT-- 6372 Query 159911 TTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTT- 159969 |||||||||| || || ||||| || |||| |||||| || | |||| || || Sbjct 6373 -TAAACAGGAGACAAGCGAAGTCACAATGCAATCCCTCATCTCTGCTTATGAGTTCATTA 6431 Query 159970 -GGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAG 160028 || |||| || |||||||| | || ||| || |||||||| || ||||||||| Sbjct 6432 CTGA-ATGA-CAGCCCCGGCATAAGTCCTCGCTTCTTTAGCCAAAAGATAGCCGCAAAAC 6489 Query 160029 CACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAG 160071 ||| ||||| | ||||| || || ||||| || || || Sbjct 6490 TACCAGAGAAAAACACACCCTCGACTGCTGCAAAAGCGACTAG 6532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793282917626640