Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7169 159 3e-34 >seq7169 Length=15740 Score = 159 bits (176), Expect = 3e-34 Identities = 514/786 (65%), Gaps = 14/786 (2%) Strand=Plus/Plus Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTA 132771 || || || | ||| | || || | |||||| |||||||| |||| || |||||| Sbjct 6201 AGTTCAACTAACAGTCGATCAGCGATGAACTCAATGTATTGGCACATTAATTTGCAATTC 6260 Query 132772 AGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCG 132831 | ||| | ||| | || || || ||||| | | ||| | || || || |||| || Sbjct 6261 ATTCCTATCAGGCTAACAGGTAGAGCTTCCGACAAAAACTGCTGTTCTATCACGACAGCT 6320 Query 132832 TCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATC 132891 || | | || | || |||| | ||| | ||| | || || |||| Sbjct 6321 TCTTTCATAATCAACTCAATGCGCTCTTTAGGAGGCTTCTTCACTATGTGTTTAAACAGG 6380 Query 132892 AAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTC 132951 | ||||| ||||| |||||||| ||||| || ||| |||||||| || ||||| | | Sbjct 6381 AGACAAGCGAAGTCACAATGCAATCCCTCATCTCTGCTTATGAGTTCATTACTGAATGAC 6440 Query 132952 AAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAG 133011 | || ||||| || || || || || |||||||| || || || ||||| || || || Sbjct 6441 AGCCCCGGCATAAGTCCTCGCTTCTTTAGCCAAAAGATAGCCGCAAAACTACCAGAGAAA 6500 Query 133012 AAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCT 133070 || || |||||||| || || ||||| || || || || | ||||| | ||| | Sbjct 6501 AACACACCCTCGACTGCTGCAAAAGCGACTAGACGTTCTGCAAACGTAGACTTAGAATCA 6560 Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTG--ACGCACGGCATCGTTTCG-AT 133127 |||||||| ||| ||||| | ||||| ||| | || || || ||| | || Sbjct 6561 C-CGATCCAGTCCAGTGCCCACTGAGCCTT--CTTAGCAACACAATCCAG-GTTACTTAT 6616 Query 133128 GGCGTTCAACAAACGGAGTTTCTCT--TCCGAGGAACGCACGTAGGTGTCGATGAGGGTC 133185 || || || || | | | ||||| | |||| | | || |||||||| | Sbjct 6617 TGCATTGAA--AAGGAAATCTCTCTCTTTCGAGTCCCTAATATATGTGTCGATTAATAAG 6674 Query 133186 GAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCC 133245 || |||||||| ||||||| ||||| || || || || | || || || || || | Sbjct 6675 GAGTACATTTCGGAGTGTATATTCTCAATAGCTATCTGCATACCATAGAAACAACGGACT 6734 Query 133246 TCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305 ||| | ||||||||||||| ||||| || | | || || ||||| || || Sbjct 6735 TCGGGGATCTGCACTTCTTGACTAAAACGTTCTAGTAAGTTCTCAAGAACGATTCCATCA 6794 Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC 133365 || || ||||| || || | ||||| || ||||| || || | || | | Sbjct 6795 CTTGCAGCGAAGAATGCTAACACGTATGATATAAAATGACGTTCTCCCACTTTGAGGGAG 6854 Query 133366 TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCG 133425 ||||| || ||||||||| | || || || || || ||||| ||||| || | Sbjct 6855 TCCCAATCAACTAAGTCCTTGGATAAATCTACTTCTTCCACAGTCCAGAACGATGCTACA 6914 Query 133426 GCTTTTTTGTACATACT-CCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCG 133484 ||||| || || | ||| ||| | || ||||||||| || |||| ||||| ||| | Sbjct 6915 GCTTTCTTATA-AAACTGCCAAACATCGTGATATTGTATTGGGAAAAGTACAAATCGGTG 6973 Query 133485 GGGGTT 133490 || || Sbjct 6974 CGGATT 6979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498995086872960