Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq52544 86.0 8e-12 >seq52544 Length=3719 Score = 86.0 bits (94), Expect = 8e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 176888 GAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGA 176947 || || ||||| |||||| || || || || || ||||| || || | ||| | | Sbjct 98 GATGCCTCACGCACATTCAATAGTTTACCTCGTAGTGGAAAGACGCCATAATTATCTCTA 157 Query 176948 CCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATG 177007 ||||| || ||||| || || || | |||||| || || ||||| || || | ||| Sbjct 158 CCAACAACTCCAAGACCAGCTACAGCCAACGTTTTAGCTGAGTCACCTTCAGTTAAGATA 217 Query 177008 AGTGTACACTTGCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATA 177067 || ||||| | | || | | |||||||| || || |||||||||||||| ||||| Sbjct 218 AGCGTACATTGGGATGAGTTTTTAGTACCCGCGTTATTAGCATCATCCAATTTAGGAATT 277 Query 177068 CC 177069 || Sbjct 278 CC 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619280792185680