Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq7169 102 1e-16 >seq7169 Length=15740 Score = 102 bits (112), Expect = 1e-16 Identities = 224/334 (67%), Gaps = 4/334 (1%) Strand=Plus/Plus Query 119322 AGACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGA 119381 || ||||| | || |||| || |||| | |||| || ||||||| ||||| || Sbjct 6213 AGTCGATCAGCGATGAACTCAATGTATTGGCACATTAATTTGCAATTCATTCCTATCAGG 6272 Query 119382 TTACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATG 119441 || || ||||| || | || | || || ||| | ||||||||||||| || Sbjct 6273 CTAACAGGTAGAGCTTCCGACAAAAACTGCTGTTCTATCACGACAGCTTCTTTCATAATC 6332 Query 119442 GAGTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACA--ACTCTACGGCAA 119499 | | ||| ||| | | || || || | | ||||||||| | | | || | Sbjct 6333 AACTCAATGCGCTCTTTAGGAGGCTTCTTCACTATGTGTTTAAACAGGAGACAA--GCGA 6390 Query 119500 ATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCA 119559 | || ||| | || ||||| | ||||| ||||||||||| | || || |||| Sbjct 6391 AGTCACAATGCAATCCCTCATCTCTGCTTATGAGTTCATTACTGAATGACAGCCCCGGCA 6450 Query 119560 TGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCT 119619 | ||||||| ||||||||||||||||| || |||||| ||||| || || | |||| Sbjct 6451 TAAGTCCTCGCTTCTTTAGCCAAAAGATAGCCGCAAAACTACCAGAGAAAAACACACCCT 6510 Query 119620 CCACACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653 | || || ||||||| |||||| || ||||| Sbjct 6511 CGACTGCTGCAAAAGCGACTAGACGTTCTGCAAA 6544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587589189748200