Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq27942 122 6e-23 >seq27942 Length=6783 Score = 122 bits (134), Expect = 6e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||||||||| || || ||||| || ||||| |||| || |||||||| ||||| || Sbjct 3775 TCTTTCTGAATATTGTAATCCGACAGTGTTCGTCCATCTTCAAGCTGTTTACCGGCGAAA 3716 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || || ||| | || | || |||||||| |||||| || || | Sbjct 3715 ATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCTTGAATCTTAGCCTTCACTGCC 3656 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||| | ||| | | ||||| || | |||||||||||| ||||| || || |||||| Sbjct 3655 TCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGTTTTCCCCGTTAGTGTTTTCACA 3596 Query 34971 AAGATCTGCATATTC 34985 || |||||||| ||| Sbjct 3595 AAAATCTGCATCTTC 3581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323888323325832