Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq27942 96.9 3e-15 >seq27942 Length=6783 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| |||||||||||||| || || |||| | || || | ||| |||||||| || Sbjct 3776 CTCTTTCTGAATATTGTAATCCGACAGTGTTCGTCCATCTTCAAGCTGTTTACCGGCGAA 3717 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || ||||||||||| | || | ||| |||||||| |||||| || || | Sbjct 3716 AATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCTTGAATCTTAGCCTTCACTGC 3657 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || | | || || || | || || ||||| ||||| | ||||| || Sbjct 3656 CTCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGTTTTCCCCGTTAGTGTTTTCAC 3597 Query 48755 AAAAATCTGCATC 48767 ||||||||||||| Sbjct 3596 AAAAATCTGCATC 3584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380063063576187