Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7169 87.8 2e-11 >seq7169 Length=15740 Score = 87.8 bits (96), Expect = 2e-11 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 869169 CACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGA 869228 ||| |||| | || || || | || || | ||| || || || | || || ||||| | Sbjct 6394 CACAATGCAATCCCTCATCTCTGCTTATGAGTTCATTACTGAATGACAGCCCCGGCATAA 6453 Query 869229 GGCCGCGCTTCTTGAGCCAAAAGAT-GGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCG 869287 | || |||||||| ||||||||||| | |||| ||||| || |||||||| | |||||| Sbjct 6454 GTCCTCGCTTCTTTAGCCAAAAGATAGCCGCA-AAACTACCAGAGAAAAACACACCCTCG 6512 Query 869288 ACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGT 869322 || || ||||| ||| || || || ||||| || Sbjct 6513 ACTGCTGCAAAAGCGACTAGACGTTCTGCAAACGT 6547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6091680757727973