Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq27942 113 4e-20 >seq27942 Length=6783 Score = 113 bits (124), Expect = 4e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 110263 GAGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAAC 110322 |||||| || ||||| || ||||| ||||| |||| || |||||||| ||| | ||| Sbjct 3575 GAGATTGAAGATGCAGATTTTTGTGAAAACACTAACGGGGAAAACCATAACCCTTGAAGT 3634 Query 110323 GGAGCCTGACGATACTGTCG-GCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGC 110381 || |||| || || | | | ||| || | |||||| ||||| |||||| | | Sbjct 3635 TGAACCTGCTGACACCATAGAGGCAGTGAAGGCT-AAGATTCAAGACAAGGAAGGCATAC 3693 Query 110382 CCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGG 110441 | |||||||| | ||||||| || ||||||||||| || |||| ||||| || Sbjct 3694 CACCAGATCAACAGCGTCTTATTTTCGCCGGTAAACAGCTTGAAGATGGACGAACACTGT 3753 Query 110442 CGGATTACAACATTCAAAAAGAATCTACGTTGCA 110475 |||||||||| ||||| ||||| || || || || Sbjct 3754 CGGATTACAATATTCAGAAAGAGTCGACATTACA 3787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411893820057917