Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2237 82.4 5e-11 >seq2237 Length=24823 Score = 82.4 bits (90), Expect = 5e-11 Identities = 90/120 (75%), Gaps = 6/120 (5%) Strand=Plus/Plus Query 8712 AATCACGCCGTACTGTTGGTTGGATATGGCGTTGACAACGATG------TGCCCTACTGG 8765 || ||||| |||||| | ||||| ||||| |||||| | ||| | ||||||||| Sbjct 15862 AACCACGCTGTACTGCTAGTTGGTTATGGTGTTGACCAGGATACAAATCTACCCTACTGG 15921 Query 8766 ATACTAAAAAACAGCTGGGGAGAGAAATGGGGAGAAAATGGATTCTTCAGGGTACAACGT 8825 | ||||||| || ||||| | ||||||| ||||||||||||||| | ||| |||| Sbjct 15922 AATATAAAAAATAGTTGGGGTGGTCAATGGGGTGAAAATGGATTCTTCCGAATACTACGT 15981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324945091670411