Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq27942 91.5 1e-13 >seq27942 Length=6783 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 107546 GAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAAC 107605 ||| || || ||||| |||||||| ||||| |||| || |||||||| ||| | ||| Sbjct 3575 GAGATTGAAGATGCAGATTTTTGTGAAAACACTAACGGGGAAAACCATAACCCTTGAAGT 3634 Query 107606 GGAGGCTGGCGATACTGTCG-GCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGC 107664 || ||| || || | | | ||| || | || |||| || || |||||| | | Sbjct 3635 TGAACCTGCTGACACCATAGAGGCAGTGAAGGCTAA-GATTCAAGACAAGGAAGGCATAC 3693 Query 107665 CCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGG 107724 | ||||| ||| | ||||||| || ||||||||||| || || | |||| || Sbjct 3694 CACCAGATCAACAGCGTCTTATTTTCGCCGGTAAACAGCTTGAAGATGGACGAACACTGT 3753 Query 107725 CGGACTACAACATTCAAAAGGAGTCTACGTTGCA 107758 |||| ||||| ||||| || ||||| || || || Sbjct 3754 CGGATTACAATATTCAGAAAGAGTCGACATTACA 3787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397961079708241