Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq27942 104 2e-17 >seq27942 Length=6783 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||||| | |||||||| ||||| ||||| || || || || |||||| Sbjct 3794 AACAAGATGTAATGTCGACTCTTTCTGAATATTGTAATCCGACAGTGTTCGTCCATCTTC 3735 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||||||||||| | || ||||||||||||||||| ||||||||||| || || Sbjct 3734 AAGCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCTTG 3675 Query 132034 AATTTTTTGTTTCAACTG-TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTT 132092 ||| || ||| |||| || | || || | || || ||||| | || | |||| Sbjct 3674 AATCTTAGCCTTC-ACTGCCTCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGTTT 3616 Query 132093 TACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || || ||||| | ||||||||||| Sbjct 3615 TCCCCGTTAGTGTTTTCACAAAAATCTGCAT 3585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475488965310840