Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq7169 109 2e-18 >seq7169 Length=15740 Score = 109 bits (120), Expect = 2e-18 Identities = 138/188 (73%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 || || |||||||||||||| | ||||| || |||| || || || ||| || | Sbjct 6538 GAACGTCTAGTCGCTTTTGCAGCAGTCGAGGGTGTGTTTTTCTCTGGTAG-TTTTGCGGC 6480 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 ||||| ||| | || ||||| |||||||||| || ||| | || ||||| ||||| || Sbjct 6479 TATCTTTTGGCTAAAGAAGCGAGGACTTATGCCGGGGCTGTCATTCAGTAATGAACTCAT 6420 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACATCGT 443885 || | || ||||| |||||||| |||||||| ||||| || | |||||||| || Sbjct 6419 AAGCAGAGATGAGGGATTGCATTGTGACTTCGCTTGTCTCCTGT---TTAAACACATAGT 6363 Query 443886 GCACAAGC 443893 | | |||| Sbjct 6362 GAAGAAGC 6355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1584502586305205