Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq28879 84.2 3e-11 >seq28879 Length=6601 Score = 84.2 bits (92), Expect = 3e-11 Identities = 187/281 (67%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 111116 TCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 111175 ||||| ||||| ||||| ||||||||| |||| |||| || | || |||||| Sbjct 4718 TCAACAGGATAGAAATTAACATCAATGACTTTATTTAAATTTCGCGTGATAACTTTTGTG 4659 Query 111176 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 111235 | ||| || ||||| |||||||||| ||| | | || ||| | ||| ||| Sbjct 4658 ACTTCTTGGAGTTTAGTGAAATCAAAAGTACGATTTTGGCGATCAACAAATTTTCCTAGG 4599 Query 111236 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 111295 | || || || |||||||| ||||| || || || | | || || | |||||| Sbjct 4598 GAAATAGAGGCTAAATTGCAGACAGCTGTTTCTTCAGGAGACGAATATTCAACGATTTCT 4539 Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 ||||| | |||| | ||| || ||||||| || |||||| || ||||| Sbjct 4538 GTACACAGGTTGCTGCAGCGAATTGTTCCCAAATGCTGATGGTTAGATTTTCGATTGCAT 4479 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396 ||||| || || |||||| | || | || || || |||| Sbjct 4478 GCATCTTTATACAGCATGAATGGGTTGCCTGTTTCAATCTG 4438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626553228002400