Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq52544 82.4 9e-11 >seq52544 Length=3719 Score = 82.4 bits (90), Expect = 9e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 169349 TTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGACT 169408 || || || || || ||||| || || | ||| | |||||| || ||||| || || Sbjct 122 TTACCTCGTAGTGGAAAGACGCCATAATTATCTCTACCAACAACTCCAAGACCAGCTACA 181 Query 169409 GCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTTTCCAGATTGTGCC 169468 || | || || || |||||||| || || | ||| |||||||||| || | | Sbjct 182 GCCAACGTTTTAGCTGAGTCACCTTCAGTTAAGATAAGCGTACATTGGGATGAGTTTTTA 241 Query 169469 GTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACC 169506 |||||||| || || |||||||||||||| ||||| || Sbjct 242 GTACCCGCGTTATTAGCATCATCCAATTTAGGAATTCC 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581887446829560