Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq27942 118 7e-22 >seq27942 Length=6783 Score = 118 bits (130), Expect = 7e-22 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||| || ||||| || ||||| || |||||||| | |||||||| ||||||||||| || Sbjct 3776 CTCTTTCTGAATATTGTAATCCGACAGTGTTCGTCCATCTTCAAGCTGTTTACCGGCGAA 3717 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || | ||||||||| || || || | || ||||||||| ||||| || | | Sbjct 3716 AATAAGACGCTGTTGATCTGGTGGTATGCCTTCCTTGTCTTGAATCTTAGCCTTCACTGC 3657 Query 34635 TAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694 || ||||| | || ||||| | |||||| ||||| || |||| |||||||| Sbjct 3656 CTCTATGGTGTCAGCAGGTTCAACTTCAAGGGTTATGGTTTTCCCCGTTAGTGTTTTCAC 3597 Query 34695 AAAAATCTGCATGTT 34709 |||||||||||| || Sbjct 3596 AAAAATCTGCATCTT 3582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314007060405977