Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq27942 149 5e-31 >seq27942 Length=6783 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || || | || || |||||||| ||||| | Sbjct 3585 ATGCAGATTTTTGTGAAAACACTAACGGGGAAAACCATAACCCTTGAAGTTGAACCTGCT 3644 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || ||| || || || ||||||||||| |||||||||||||| |||||| Sbjct 3645 GACACCATAGAGGCAGTGAAGGCTAAGATTCAAGACAAGGAAGGCATACCACCAGATCAA 3704 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| ||||| | ||||| | || | || |||||||| Sbjct 3705 CAGCGTCTTATTTTCGCCGGTAAACAGCTTGAAGATGGACGAACACTGTCGGATTACAAT 3764 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || |||||||| |||||| | ||| | ||| | || ||||| || Sbjct 3765 ATTCAGAAAGAGTCGACATTACATCTTGTTCTTCGTCTTCGTGGTGGTAT 3814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433923129960017