Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq27942 136 9e-27 >seq27942 Length=6783 Score = 136 bits (150), Expect = 9e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || ||||| || | || |||||||| || || || ||||||| || || Sbjct 3806 ACGAAGACGAAGAACAAGATGTAATGTCGACTCTTTCTGAATATTGTAATCCGACAGTGT 3747 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||||||| ||||| || || ||||| ||||| || ||||| || || || | || Sbjct 3746 TCGTCCATCTTCAAGCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGGTATGCC 3687 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| || ||||| ||||| || |||||||||| |||||| || || Sbjct 3686 TTCCTTGTCTTGAATCTTAGCCTTCACTGCCTCTATGGTGTCAGCAGGTTCAACTTCAAG 3627 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || ||||| || || || ||||| | |||||| || Sbjct 3626 GGTTATGGTTTTCCCCGTTAGTGTTTTCACAAAAATCTGCATCTT 3582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156354412366685