Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq27942 131 1e-25 >seq27942 Length=6783 Score = 131 bits (144), Expect = 1e-25 Identities = 159/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || ||||| || ||||| ||||| || || || |||||||| | Sbjct 3582 AAGATGCAGATTTTTGTGAAAACACTAACGGGGAAAACCATAACCCTTGAAGTTGAACCT 3641 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || ||| ||||| ||||| |||| |||||| Sbjct 3642 GCTGACACCATAGAGGCAGTGAAGGCTAAGATTCAAGACAAGGAAGGCATACCACCAGAT 3701 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTTAGGCGATT 23785 ||||||||| | || || ||||| ||||| || ||||| | ||| |||| | | |||| Sbjct 3702 CAACAGCGTCTTATTTTCGCCGGTAAACAGCTTGAAGATGGACGAACACTGTCG--GATT 3759 Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| || || |||||||| ||||||||| | ||| Sbjct 3760 ACAATATTCAGAAAGAGTCGACATTACATCTTGTT 3794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337233615411452