Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq27942 131 4e-25 >seq27942 Length=6783 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||| || | || || ||||| || | ||||||||| | || || Sbjct 3806 ACGAAGACGAAGAACAAGATGTAATGTCGACTCTTTCTGAATATTGTAATCCGACAGTGT 3747 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| ||||| || || ||||| ||||| || ||||| || || || || || Sbjct 3746 TCGTCCATCTTCAAGCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGGTATGCC 3687 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| ||||| |||||| || || |||||||| | | ||| || || | Sbjct 3686 TTCCTTGTCTTGAATCTTAGCCTTCACTGCCTCTATGGTGTCAGCAGGTTCAACTTCAAG 3627 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || || ||||| | ||||| | || | ||||| || Sbjct 3626 GGTTATGGTTTTCCCCGTTAGTGTTTTCACAAAAATCTGCATCTT 3582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1189653052408086