Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichobilharzia_20regenti_20[genbank_20GCA_5F000950905.1_202014-09- 24] 188,369 sequences; 701,762,036 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq27942 136 8e-27 >seq27942 Length=6783 Score = 136 bits (150), Expect = 8e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || |||||||| || ||||| || || ||||| || | Sbjct 3812 ACCACCACGAAGACGAAGAACAAGATGTAATGTCGACTCTTTCTGAATATTGTAATCCGA 3753 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || || ||||| ||||| || || | ||| ||||| || || Sbjct 3752 CAGTGTTCGTCCATCTTCAAGCTGTTTACCGGCGAAAATAAGACGCTGTTGATCTGGTGG 3693 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||| ||||| || || || | || || ||||| | || ||| || Sbjct 3692 TATGCCTTCCTTGTCTTGAATCTTAGCCTTCACTGCCTCTATGGTGTCAGCAGGTTCAAC 3633 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA 283104 ||| || || || || || ||||| | || || || || |||||||| |||| Sbjct 3632 TTCAAGGGTTATGGTTTTCCCCGTTAGTGTTTTCACAAAAATCTGCATCTTCA 3580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1044212918165326