Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 >seq3 Length=4565964 Score = 134 bits (148), Expect = 1e-26 Identities = 202/287 (70%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || | ||||||||| || ||||| |||||||| ||||||||||| Sbjct 1995576 ATGTAGGTGTCGATAAGCAAGCTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGG 1995635 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || || || ||||| ||||| || | | || || ||| | ||| || ||| | | Sbjct 1995636 AAGCCATAGAAGCAGCGGGCCTCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAG 1995695 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || || || ||||||||||| || ||||| || || |||| | |||| ||||| | | Sbjct 1995696 TTCTCATTGACGATGCCGTCACTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGT 1995755 Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 || || ||| | || | ||||||| || ||| ||||| | ||| || || || Sbjct 1995756 TTCTCCTCCTTCTTGAGCATTTCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCT 1995815 Query 17474 GGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATC 17520 ||||| ||| ||| | |||||||| ||||| | ||| || || Sbjct 1995816 ACTGTCCAGAAAGACGCCTCGGCCTTTTTGTACATCTCCCAGATGTC 1995862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517534181650200