Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 149 6e-31 seq61 84.2 2e-11 >seq3 Length=4565964 Score = 149 bits (164), Expect = 6e-31 Identities = 205/287 (71%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || || || || || |||||||| |||||||| |||||||| ||||||||||| Sbjct 1995576 ATGTAGGTGTCGATAAGCAAGCTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGG 1995635 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || ||||||||||| || ||||| | | || || ||| | || || ||| ||| | Sbjct 1995636 AAGCCATAGAAGCAGCGGGCCTCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAG 1995695 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 |||||||| ||||| |||||||| || ||||| || |||| | ||| ||||| | | Sbjct 1995696 TTCTCATTGACGATGCCGTCACTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGT 1995755 Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCT 16711 || || || | || || | ||| || || ||| ||||| | ||| || || ||| Sbjct 1995756 TTCTCCTCCTTCTTGAGCATTTCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCT 1995815 Query 16712 GGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATC 16758 ||||| || ||| | |||||||| ||||| | ||| || || Sbjct 1995816 ACTGTCCAGAAAGACGCCTCGGCCTTTTTGTACATCTCCCAGATGTC 1995862 >seq61 Length=1822817 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 16516 CTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTA 16575 ||| || || || || || |||||||| |||| || || | || || ||||| Sbjct 745893 CTCCATTGCCATTTGGAAGCCATAGAAACATCTTGCTTCAGGAATCTGAACTTCTTGACC 745834 Query 16576 AAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATAT 16635 ||| | || | || |||||||| ||||| ||||||||||| ||||| || |||| || Sbjct 745833 AAACCTCTCTACTAGATTCTCATTGACGATGCCGTCACTTGCTGCAAAGAATGCCAGGAT 745774 Query 16636 GTGCTTAATGAAATATTTTTC 16656 |||||| ||||||| || ||| Sbjct 745773 GTGCTTGATGAAATGTTGTTC 745753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511403116919800