Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 seq61 100 3e-16 seq31 89.7 6e-13 >seq3 Length=4565964 Score = 111 bits (122), Expect = 2e-19 Identities = 184/266 (69%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 24423 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 24482 || ||||| || || || ||||| || ||||| || || || || ||||| || | ||| Sbjct 1995597 CTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAAGCCATAGAAGCAGCGGGCC 1995656 Query 24483 TCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 24542 |||| | ||| || || | || || || | || || ||||| || || |||||| Sbjct 1995657 TCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTCTCATTGACGATGCCGTCA 1995716 Query 24543 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 24602 ||||| ||||| || |||| ||||| || || | ||| || || | || | Sbjct 1995717 CTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTCTCCTCCTTCTTGAGCATT 1995776 Query 24603 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 24662 | ||| || | ||| || || | ||| || || || |||||||| || || ||||| Sbjct 1995777 TCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCTACTGTCCAGAAAGACGCCTCG 1995836 Query 24663 GCCTTTTTATACATATTCCAGATGTC 24688 |||||||| ||||| | ||||||||| Sbjct 1995837 GCCTTTTTGTACATCTCCCAGATGTC 1995862 >seq61 Length=1822817 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24447 TCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAA 24506 || || |||||||| || || ||||||||||| || || | |||||| |||||| || | Sbjct 745892 TCCATTGCCATTTGGAAGCCATAGAAACATCTTGCTTCAGGAATCTGAACTTCTTGACCA 745833 Query 24507 AATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 24566 || | ||| ||| ||| ||||| || || |||||||| |||||||| || |||| | Sbjct 745832 AACCTCTCTACTAGATTCTCATTGACGATGCCGTCACTTGCTGCAAAGAATGCCAGGATG 745773 Query 24567 TGTTTTATAAAATATTTTTC 24586 || || || |||| || ||| Sbjct 745772 TGCTTGATGAAATGTTGTTC 745753 >seq31 Length=3510018 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 53750 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 53809 |||| ||| ||||| ||||| || ||||| ||||||||||| || | || || || ||| Sbjct 1270723 TATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTTA 1270664 Query 53810 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGAT 53869 ||||| |||||| ||||| || || || ||| | || |||||||| || | || | Sbjct 1270663 CTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGCC 1270604 Query 53870 TCTATAATCGCTTTCCAGA 53888 | ||| || || | ||||| Sbjct 1270603 TGTATGATGGCCTGCCAGA 1270585 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 53750 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 53809 |||| || ||||| ||||| || ||||| ||||||||||| || | || || || ||| Sbjct 1271400 TATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTTA 1271341 Query 53810 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGAT 53869 ||||| |||||| ||||| || || || ||| | || |||||||| || | || | Sbjct 1271340 CTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGCC 1271281 Query 53870 TCTATAATCGCTTTCCAGA 53888 | |||||| || | ||||| Sbjct 1271280 TGTATAATGGCCTGCCAGA 1271262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593708501017200