Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq107 102 9e-17 seq19 98.7 1e-15 seq18 96.9 4e-15 seq176 95.1 1e-14 seq46 95.1 1e-14 >seq107 Length=1005640 Score = 102 bits (112), Expect = 9e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| | |||| |||| ||||||||||||| ||||||| | ||||||| | || |||| Sbjct 120941 AAAAATGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATAC 120882 Query 60117 TCACCACTATACTACCGAGGATTG 60140 | |||||||||||||||||||||| Sbjct 120881 TAACCACTATACTACCGAGGATTG 120858 >seq19 Length=2857068 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||||||||| ||||||||||||| ||||||| | ||||||| | || ||||| |||||| Sbjct 651938 TCTCCTCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACT 651997 Query 60125 ATACTACCGAGGATTGA 60141 ||||||||||||| ||| Sbjct 651998 ATACTACCGAGGACTGA 652014 Score = 96.9 bits (106), Expect = 4e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| ||||| |||| ||||||||||||| || |||| | ||||||| | || |||| Sbjct 833808 AAAAATGGTCTCCCCGGCGGGGAATCGAACCCCGGACTCCTGAGTGACAGTCAGAGATAC 833749 Query 60117 TCACCACTATACTACCGAGGATT 60139 | ||||||||||||||||||||| Sbjct 833748 TAACCACTATACTACCGAGGATT 833726 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||| | ||||||| | || ||||| |||||| Sbjct 652106 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACT 652165 Query 60125 ATACTACCGAGGATTGA 60141 ||||||||||||| ||| Sbjct 652166 ATACTACCGAGGACTGA 652182 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||| | ||||||| | ||||||| | || ||||| |||||| Sbjct 653582 TCTCCCCGGCGGGGAATCGAACACCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACT 653641 Query 60125 ATACTACCGAGGATTGA 60141 ||||||||||||| ||| Sbjct 653642 ATACTACCGAGGACTGA 653658 >seq18 Length=2396980 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||| | ||||||| | || ||||| ||||||| Sbjct 524100 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACTA 524041 Query 60126 TACTACCGAGGATTGA 60141 |||||||||||||||| Sbjct 524040 TACTACCGAGGATTGA 524025 >seq176 Length=618158 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/84 (86%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 60059 AAAT-TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||||| | || ||||||||||||| ||||||| | || |||| |||| ||||| Sbjct 606609 AAATCTTTCTCCCCCGCGGGGAATCGAACCCCGGTCTCCTGAGTTACAGTCGGAAATACT 606550 Query 60118 CACCACTATACTACCGAGGATTGA 60141 ||||||||||||||||||| ||| Sbjct 606549 AACCACTATACTACCGAGGACTGA 606526 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 || ||||| |||| ||| |||||| || || ||||| |||| ||| || || |||| Sbjct 484173 CAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTC 484114 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||| || || || || || ||||||||||||| ||| | || |||||||| Sbjct 484113 CTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGAATGCCTTCCTTGTC 484054 Query 43091 CATGATTTT 43099 | ||| || Sbjct 484053 CTGGATCTT 484045 Score = 89.7 bits (98), Expect = 6e-13 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 60059 AAAT-TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| ||||||| |||| ||||||||||||| ||||||| | ||||||| | || || | Sbjct 606445 AAATCTTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATGAT 606386 Query 60118 CACCACTATACTACCGAGGATTGA 60141 ||||||||||||||||||| ||| Sbjct 606385 AACCACTATACTACCGAGGACTGA 606362 >seq46 Length=1707116 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||| | ||||||| | || ||||| ||||||| Sbjct 139422 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACTA 139363 Query 60126 TACTACCGAGGATTG 60140 ||||||||||||||| Sbjct 139362 TACTACCGAGGATTG 139348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571804984274200