Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq3 109 7e-19 seq61 100 4e-16 seq31 93.3 6e-14 >seq3 Length=4565964 Score = 109 bits (120), Expect = 7e-19 Identities = 186/268 (69%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 36446 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 36505 || ||||| || || || ||||| || ||||| || || || || ||||| || | ||| Sbjct 1995597 CTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAAGCCATAGAAGCAGCGGGCC 1995656 Query 36506 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 36565 |||| | ||| || || | || || || | || || ||||| || || |||||| Sbjct 1995657 TCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTCTCATTGACGATGCCGTCA 1995716 Query 36566 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTAGTT 36623 ||||| ||||| || |||| ||||| || || | ||| || | || || || Sbjct 1995717 CTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTCTCCTCCTTCTTG--AGCA 1995774 Query 36624 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683 | | ||| || | ||| || || | ||| || || || |||||||| || || |||| Sbjct 1995775 TTTCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCTACTGTCCAGAAAGACGCCT 1995834 Query 36684 CTGCCTTTTTATACATATTCCAGATGTC 36711 | |||||||| ||||| | ||||||||| Sbjct 1995835 CGGCCTTTTTGTACATCTCCCAGATGTC 1995862 >seq61 Length=1822817 Score = 100 bits (110), Expect = 4e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 36470 TCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAA 36529 || || |||||||| || || ||||||||||| || || | |||||| |||||| || | Sbjct 745892 TCCATTGCCATTTGGAAGCCATAGAAACATCTTGCTTCAGGAATCTGAACTTCTTGACCA 745833 Query 36530 AATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 36589 || | ||| ||| ||| ||||| || || |||||||| |||||||| || |||| | Sbjct 745832 AACCTCTCTACTAGATTCTCATTGACGATGCCGTCACTTGCTGCAAAGAATGCCAGGATG 745773 Query 36590 TGTTTTATAAAATATTTTTC 36609 || || || |||| || ||| Sbjct 745772 TGCTTGATGAAATGTTGTTC 745753 >seq31 Length=3510018 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 65781 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 65840 |||| ||| ||||| ||||| || ||||| ||||||||||| || | || || || ||| Sbjct 1270723 TATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTTA 1270664 Query 65841 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 65900 ||||| |||||| ||||| || || || ||| | || |||||||| || | |||| Sbjct 1270663 CTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGCC 1270604 Query 65901 TCTATAATCGCTTTCCAGA 65919 | ||| || || | ||||| Sbjct 1270603 TGTATGATGGCCTGCCAGA 1270585 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 65781 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 65840 |||| || ||||| ||||| || ||||| ||||||||||| || | || || || ||| Sbjct 1271400 TATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTTA 1271341 Query 65841 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 65900 ||||| |||||| ||||| || || || ||| | || |||||||| || | |||| Sbjct 1271340 CTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGCC 1271281 Query 65901 TCTATAATCGCTTTCCAGA 65919 | |||||| || | ||||| Sbjct 1271280 TGTATAATGGCCTGCCAGA 1271262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658158279062600