Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3 120 4e-22 seq61 96.9 5e-15 >seq3 Length=4565964 Score = 120 bits (132), Expect = 4e-22 Identities = 197/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 50230 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 50289 || || ||||| | | || ||||| || || || ||||| || ||||| ||||| || Sbjct 1995579 TAGGTGTCGATAAGCAAGCTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAAG 1995638 Query 50290 CCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTT 50349 || ||||| || | ||||||| | |||||| || | || || || | || || Sbjct 1995639 CCATAGAAGCAGCGGGCCTCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTC 1995698 Query 50350 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTT 50409 ||||| || || ||||||||||| ||||| || |||| ||||| || || ||||| Sbjct 1995699 TCATTGACGATGCCGTCACTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTC 1995758 Query 50410 TCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACT 50469 || | | || | | ||| || | ||| || || | ||| || || || ||| Sbjct 1995759 TCCTCCTTCTTGAGCATTTCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCTACT 1995818 Query 50470 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTC 50513 ||||| || || ||||| |||||||| ||||| | ||||||||| Sbjct 1995819 GTCCAGAAAGACGCCTCGGCCTTTTTGTACATCTCCCAGATGTC 1995862 >seq61 Length=1822817 Score = 96.9 bits (106), Expect = 5e-15 Identities = 112/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 50272 TCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAA 50331 || || ||||| || || || ||||||||||| || || | |||||| |||||| || | Sbjct 745892 TCCATTGCCATTTGGAAGCCATAGAAACATCTTGCTTCAGGAATCTGAACTTCTTGACCA 745833 Query 50332 AATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 50391 || | || ||| ||| ||||| || || |||||||| |||||||| || |||| | Sbjct 745832 AACCTCTCTACTAGATTCTCATTGACGATGCCGTCACTTGCTGCAAAGAATGCCAGGATG 745773 Query 50392 TGTTTTATAAAATGTTTTTC-GTTGGGTGT 50420 || || || ||||||| ||| | ||| ||| Sbjct 745772 TGCTTGATGAAATGTTGTTCAGATGGCTGT 745743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718252953194600