Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3 116 5e-21 seq31 89.7 7e-13 >seq3 Length=4565964 Score = 116 bits (128), Expect = 5e-21 Identities = 196/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 42335 TATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAAT 42394 || || ||||| | | || ||||| ||||| || ||||| || ||||| ||||| || Sbjct 1995579 TAGGTGTCGATAAGCAAGCTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAAG 1995638 Query 42395 CCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTT 42454 || ||||| || | |||||||| ||||| || || | || || || | || || Sbjct 1995639 CCATAGAAGCAGCGGGCCTCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTC 1995698 Query 42455 TCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 42514 || || || || ||||||||||| ||||| || |||| ||||| || || | ||| Sbjct 1995699 TCATTGACGATGCCGTCACTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTC 1995758 Query 42515 TCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACC 42574 || ||| | | | | ||| || | ||| || || | ||| || || ||||| Sbjct 1995759 TCCTCCTTCTTGAGCATTTCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCTACT 1995818 Query 42575 GTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATC 42618 ||||| || || || || |||||||| ||||| | |||||| || Sbjct 1995819 GTCCAGAAAGACGCCTCGGCCTTTTTGTACATCTCCCAGATGTC 1995862 >seq31 Length=3510018 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 71743 TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 71802 |||| ||| || || ||||| || ||||| ||||||||||| || | || || || ||| Sbjct 1270723 TATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTTA 1270664 Query 71803 CTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 71862 ||||| |||||| ||||| || || || || |||| |||||||| || | |||| Sbjct 1270663 CTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGCC 1270604 Query 71863 TCTATAATCGCTTTCCAGA 71881 | ||| || || | ||||| Sbjct 1270603 TGTATGATGGCCTGCCAGA 1270585 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 71743 TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 71802 |||| || || || ||||| || ||||| ||||||||||| || | || || || ||| Sbjct 1271400 TATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTTA 1271341 Query 71803 CTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGAT 71862 ||||| |||||| ||||| || || || || |||| |||||||| || | |||| Sbjct 1271340 CTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGCC 1271281 Query 71863 TCTATAATCGCTTTCCAGA 71881 | |||||| || | ||||| Sbjct 1271280 TGTATAATGGCCTGCCAGA 1271262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671124392991400