Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 5e-15 seq31 89.7 8e-13 seq78 87.8 3e-12 >seq3 Length=4565964 Score = 96.9 bits (106), Expect = 5e-15 Identities = 182/267 (68%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 125016 GACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGAT 125075 ||||| ||||| |||||||||||||| |||| || || ||||| || || ||||| ||| Sbjct 1995862 GACATCTGGGAGATGTACAAAAAGGCCGAGGCGTCTTTCTGGACAGTAGAGGAGGTTGAT 1995803 Query 125076 CTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATA 125135 || |||||||| || || ||||| | | || || ||| | | || || Sbjct 1995802 CTCTCCAAGGATCTACCGGACTGGGAAATGCTCAAGAAGGA---GGAGAAACACTTCATC 1995746 Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACA 125195 ||||| | ||||||||||||||| | || || |||||||| || || || || Sbjct 1995745 TCGCATGTCCTGGCCTTCTTTGCCGCCAGTGACGGCATCGTCAATGAGAACTTGGTGGAG 1995686 Query 125196 CGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 || ||| || ||| || | || |||| ||||| || || ||||| || Sbjct 1995685 CGCTTCAGCCAGGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTATGGCTTCCAGATAGCC 1995626 Query 125256 ATTGAGAACGTGCACTCGGAAATGTAC 125282 || |||||| | ||||| || |||||| Sbjct 1995625 ATCGAGAACATCCACTCAGAGATGTAC 1995599 >seq31 Length=3510018 Score = 89.7 bits (98), Expect = 8e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 || ||| |||||||| | |||||| |||||||| || |||||||| || ||||| Sbjct 1270584 CTCTGGCAGGCCATCATACAGGCTCAAACGGAGACTGGTACCCCGTACATGCTGTACAAA 1270643 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || || |||| || ||||| | || |||||||||||||| || || ||| Sbjct 1270644 GATGCCTGTAACGGCAAGAGTAACCAGCAGAACCTGGGCACCATCAAGTGCAGTAACCTG 1270703 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 |||||||| || |||| ||| || Sbjct 1270704 TGCACGGAGATCATAGAATACTCC 1270727 >seq78 Length=2036245 Score = 87.8 bits (96), Expect = 3e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 127443 GAATCCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGG 127502 ||| || || |||| ||| || ||||| ||||| || ||||||||||| | ||| ||||| Sbjct 512510 GAAGCCATGGGTCAAGTGACCCCCGTCCGGCAGGTCCAGTCCCATGATGCGACCATGCGG 512451 Query 127503 TTTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACA 127562 | ||| | ||| | |||||||||||||| ||||||||||| || || || Sbjct 512450 GCCGATGATGGCCGTGAAGACGGCAAAGTTGGCTGGAGAGCCCGAGTAGGGCTGGACGTT 512391 Query 127563 CACTCCCCATTCG 127575 |||||||| ||| Sbjct 512390 GACTCCCCACTCG 512378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741042850381400